Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02847 ATGGCCACAGAAGAACCAATCGTTGCAGTGGAACCTGTTCCCGAACCAACCATTGCTGCCGATCCTCCAGCTTCGGAGATTGATCACTCCGAACCAAAGGCTGCTGAACCAGAGAAGAAGACGAAGAAAGTAACGAAGGAATCCAAACCTAAGAAAGTTTCCAAACCACGAAACCCTGCTTCCCATCCTACTTACGAAGAGATGATTAAGGATGCAATTGTGTCTCTGAAGGAGAGGACTGGTTCAAGCCAATACGCAATTGCGAAATTCATCGAAGAAAAGCACAAACAGCTTCCTTCAAATTTCAAGAAGCTTTTGCTTCAGAATTTGAAGAAGAATGTTGCTTCTGGAAAGCTCGTTAAGGTGAAAGGTTCATTCAAGCTTTCTTCGGTGAAGGCTGTGAAAGCCAAGCCAGCTGCAAAGCCAAAGGCTAAAGCTGTTGTCAAGCCAAAGACCAAATCTGTTACCGCCAAGCCCAAGGCGGCTGCTGCCAAGCCCAAATCTGCTGCCACAAAGCCCAAGTCTGCTGCTACCAAGCCCAAACCTGCTGTTGCTAAGCCCAAAACTGCTGCAAAAGCGAAGCCTAGTGCAAAGGTTGCAAAGACAGCGACAAGGACTTCTCCGGGGAAGAAAGTTGCAACTGCAAAGCCAGCAGCAAAGAAAGTTGCGGCTGCAAAGAAGAAAGCTCCGGTGAAGAGCGTGAAGCCTAAGACTAAGACTGTTAAGTCTCCGGCAAAGAAGGTTGCGATCAAGAGAGGGGGAAGGAAATAA 771 0.4773 MATEEPIVAVEPVPEPTIAADPPASEIDHSEPKAAEPEKKTKKVTKESKPKKVSKPRNPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLSSVKAVKAKPAAKPKAKAVVKPKTKSVTAKPKAAAAKPKSAATKPKSAATKPKPAVAKPKTAAKAKPSAKVAKTATRTSPGKKVATAKPAAKKVAAAKKKAPVKSVKPKTKTVKSPAKKVAIKRGGRK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02847 256 Pfam linker histone H1 and H5 family 62 129 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02847 256 MobiDBLite consensus disorder prediction 138 256 - -
Mepo4g02847 256 SMART h15plus2 59 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02847 256 CDD H15 59 129 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02847 256 SUPERFAMILY "Winged helix" DNA-binding domain 58 142 IPR036390 -
Mepo4g02847 256 MobiDBLite consensus disorder prediction 26 44 - -
Mepo4g02847 256 PANTHER HISTONE H1 28 230 - -
Mepo4g02847 256 MobiDBLite consensus disorder prediction 1 65 - -
Mepo4g02847 256 FunFam Histone H1 56 141 - -
Mepo4g02847 256 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 61 130 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02847 256 PRINTS Histone H5 signature 48 69 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g02847 256 PRINTS Histone H5 signature 210 229 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g02847 256 PRINTS Histone H5 signature 117 141 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g02847 256 PRINTS Histone H5 signature 188 205 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g02847 256 PRINTS Histone H5 signature 75 92 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g02847 256 PRINTS Histone H5 signature 154 168 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g02847 256 MobiDBLite consensus disorder prediction 221 256 - -
Mepo4g02847 256 Gene3D - 56 148 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02847 Mepo-Chr4 37338161 37339313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02847 29 229 Single Myb Histone (SMH) Gene Family AT1G17520 23.881 2.57e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02847 K11275 - gmx:100795994 157.532