Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02845 ATGGTAGCAGAGCCTATCCAAGATCAATTGGACCACCTGCTTGCATTAGATTACTGCTATCAGGCCACTAAGGGCATGCCCGAAAACATAATTGTCGGTTCTCACGTTTGGGTTGCCGATCCAGAATTAGTTTGGATTGATGGAATAGTACTGAATATTAATGGAGAAGAAGCTGAAATTCAAACTAGCAATGAGAAGAAGGTAGTTTCCCGTCTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACCGATGGTGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGTTGTACAATTTGGAAAGTCGATATAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCGATCAATCCCTTTCAAAGTCTTCCACACCTGTATGATGCTAATGCAATGAAAAGATACAAGGGAGAGAGAATCGGAAATTTAAGCCCACATGTTTTTGCTATTGCCGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAACTCTATTCTTGTTAGTGGGGAGAGTGGCGCTGGTAAGACAGAAACCATCAAAATGCTTATGCTTTACTTGGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAGCAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCTATTCGAACTTATCTGCTTGAGAAATCTCGTATTTGCCAAATCTCTGATCCAGAGCGTAATTATCACTGTTTCTACCTTCTCTGCGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGGGACCCGAGATCATTTCATTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAAAGAGCTATGGATATTGTGGGAATCAGCCAGGAGGAGCAGGATGCAATTTTCAGAGTTATTGCTGCTATTCTCCATCTTGGAAACATTAAATTTGAAAAATCAGAAGAAACAGATTCATCAGTTCTAGCAGATAAAGACTCCAAGTTCCATCTCGAAACAACTGCAGAACTTCTAATGTGTGATCCTAATGCTGTGGAAGTTGCACTATGTAAGCGTGTGATGATCACCCCCGAAGAAATCATCGAAAGAAGTCTTGATCCTGTTGCCGCAACAGTTAGTCCAGAAAATTAA 1269 0.4035 MVAEPIQDQLDHLLALDYCYQATKGMPENIIVGSHVWVADPELVWIDGIVLNINGEEAEIQTSNEKKVVSRLSKLHPKDTDAPTDGVDDMTKLAYLHEPGVLYNLESRYKINEIYTYTGNILIAINPFQSLPHLYDANAMKRYKGERIGNLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETIKMLMLYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRICQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIKFEKSEETDSSVLADKDSKFHLETTAELLMCDPNAVEVALCKRVMITPEEIIERSLDPVAATVSPEN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02845 422 SMART MYSc_2a 79 422 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 PANTHER MYOSIN 77 418 - -
Mepo4g02845 422 Gene3D Kinesin motor domain 35 319 IPR036961 -
Mepo4g02845 422 Pfam Myosin N-terminal SH3-like domain 32 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 418 IPR027417 -
Mepo4g02845 422 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 31 80 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 Gene3D Myosin VI head, motor domain, U50 subdomain 335 421 - -
Mepo4g02845 422 ProSiteProfiles Myosin motor domain profile. 85 422 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 PRINTS Myosin heavy chain signature 219 246 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 PRINTS Myosin heavy chain signature 172 197 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 PRINTS Myosin heavy chain signature 115 134 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02845 422 Pfam Myosin head (motor domain) 87 416 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02845 Mepo-Chr4 37309970 37319914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02845 25 419 Myosins gene family AT1G08730 75.190 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02845 K10357 - gmx:100803485 710.679