Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02829 ATGATACAGGGCATGCCCGAAAACATAATTGTTGGTTCTCACGTTTGGGTTGCCGATCCAGAATTAGTTTGGATTGATGGAGTAGTACTAAATATTAATGGAGAAGAAGCTGAAATTCAAACTAGCAATGAGAAGAAGGTAGTTTCCCGTTTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACCGATGGTGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGTATAATTTGGAAAGTCGATACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCGATCAATCCCTTTCAAAGTCTTCCACATCTGTATGATGCTAATGCAATGAAAAGATACAAGGGAGAGAGAATCGGAAATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAACTCTATTCTTGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAAACCACCAAAATGCTTATGCTTTACTTGGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGTCTGTTGAACAGCAAGTTCTAGAATCAAACCCAGTTCTTGAGGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGCGCAGCCATTAGAACTTATCTTCTCGAGAAATCTCGTGTTTGCCAAATCTCAGATCCAGAGCGTAATTATCACTGTTTCTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGGGACCCGAGATCATTTCATTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAAAGAGCCATGGATATTGTGGGAATCAGCCAGGAGGAGCAGGATGCAATTTTCAGAGTTATCGCTGCTATTCTCCATCTTGGAAACATTAAATTTGAAAAATCAGAAGAAACAGATTCATCAGTTCTAGCAGATAAAGACTCCAAGTTCCATCTAGAAACAACTGCAGAACTTCTAATGTGTGATCCTAATGCTGTGGAAGTTGCACTATGTAAGCGTGTGATGATCACCCCCGAAGAAATCATCGAAAGAAGTCTTGATCCTGTTGCCGCAACAGTTAGCAGGGATGGTTTGGCGAAGACATTATATTCTCGTTTGTTTGACTGGTTAGTCCAGAAAATTAATCTCTCCATTGGGCAGGATAGTAACTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACTAATAGTTTTGAGCAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAGCAGCACTTCAACCAGCACGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTAGATCTCATTGAAAAGGTTTCTATAAACTTTGATTTTGGCTTAGTATCTCTTGCTGGAACTTATGAAAATATAGTTTGTACCCGTAAACCAGGTGGAATAGTTGCTCTGCTTGATGAGGCTTGCATGTTTCCCAAATCAACTCATGAAACATTTTCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTGTTGTTCATTATGCAGGAGTGGTCCAGTATCAATCTGAGCATTTCATAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGTCATGCTAAGTACTTCCAAATGTTCATTTGTATCAGGCCTTTTTCCTCCACTTTCTGAGGAGACAGCAAAATCTGCTAAGTTTTCTTCTATCGGCTCTCGTTTTAAGCTACAATTACAACATTTGATGGAAGCGCTCAATCTGACAGAGCCCCACTATATTAGATGTGTGAAGCCGAATAGTCTATTAAAACCTGGGATATTTGAGAATATGAACGTCATGCATCAATTACGTTCTGGTGGTGTTCTTGAAGCAGTGAGAATAAAATGTGCTGGATTCCCCACTCACAGGACCTTTCGTGAATTTTTAACTCGAGTAGGCATTCTTGCTCCAGAGATTCTTCGAGGGAACTTCGAAGAAAAGGAATCGTGTAAAATGATTTTAGAGAAGATTGGGCTGACAGATTATCAGATAGGACAAACCAAAATATTCCTAAGAGCTGGTCATATGGCAGAATTGGATGCTCGGAGAGCATACATCCTTAGCAACTCTGCAACAATTATTCAAAAGCATACTAGAACTCATTTTAGTCGGAAAACATTTACTACACTGCGGAAGTCCTCTATCTTTGTGCAGTCTATTTGCAGAGGAGAACTGGCACGGAGACAATATTATCACATGAAGAGGAAAGCAGCTGCCATCAAAATTCAAGCCTATACACGTGGAAGAATAGCCAGAAAATGCTACTCTGAAATGAAGATTTCTGTCGTTGTCTTACAATCAGGTTTTCAGGCTATGGCGGCTCGACGTGCTCGTGATAAATTCAGACATATAAGGCAAACTAGGTCATCAACTATTATTCAGTCCTATTGGCGGCGACATAAAGCTCTCGTGGACTATCAGAACCTTAAGAAAGCGTCAATCATTTCACAAAGTGTCAATCACTCCAACGATGAACATCAGCAGAAGGTTGTGGAGATATTAGTTGAAAATGAAAGTACTTCCATGAAAGAATCTTCAAATTCACTCCACGAGGAATCCTCAAGTTCTTTCCAAGATAATGAAAGCATTGAAGCTATTAAAGATTTCTCTAGTCCCATCATAGACACTGAAAGAAATGAAGCTATTAGGGATTGCTCTAGTCCCCTCAGAGACACTGAAATCAATGAAGCTATTAAGGATTTCTCTAGTCCCCTTGGAGACACCGAAAAGATTGAGGCTCTTTCTGCAGAAATAAAAACTTTAAAGGTCATGTTGCAGGAAGAAAAACAAAAAACTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCCAGCGAAGAGTTACGCAAAAAGTTAACTGAAACTGAAAAAAGAGTATATCAGCTTCAAGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGACAATCTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGACGTTGCTTCCAGTAACTCTGATTCTTCATCTACAGACTCTGATTTCACATTTCCAGCACCCGTTGCAAATCCAGAAGCATTATCTTCTACCCAACTAGTAGTTCAGGATGTCACTGCAGCTGAAGGATCAGGATCTGGAAGTGAAAAAGAAGGTTCGTTTGATGATTTCTTCTAG 3399 0.3934 MIQGMPENIIVGSHVWVADPELVWIDGVVLNINGEEAEIQTSNEKKVVSRLSKLHPKDTDAPTDGVDDMTKLAYLHEPGVLYNLESRYKINEIYTYTGNILIAINPFQSLPHLYDANAMKRYKGERIGNLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMLYLAYLGGHTASEGRSVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIKFEKSEETDSSVLADKDSKFHLETTAELLMCDPNAVEVALCKRVMITPEEIIERSLDPVAATVSRDGLAKTLYSRLFDWLVQKINLSIGQDSNSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKVSINFDFGLVSLAGTYENIVCTRKPGGIVALLDEACMFPKSTHETFSTKLYQTFKDHKRFIKPKLARSDFTVVHYAGVVQYQSEHFIDKNKDYVVPEHQVMLSTSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQHLMEALNLTEPHYIRCVKPNSLLKPGIFENMNVMHQLRSGGVLEAVRIKCAGFPTHRTFREFLTRVGILAPEILRGNFEEKESCKMILEKIGLTDYQIGQTKIFLRAGHMAELDARRAYILSNSATIIQKHTRTHFSRKTFTTLRKSSIFVQSICRGELARRQYYHMKRKAAAIKIQAYTRGRIARKCYSEMKISVVVLQSGFQAMAARRARDKFRHIRQTRSSTIIQSYWRRHKALVDYQNLKKASIISQSVNHSNDEHQQKVVEILVENESTSMKESSNSLHEESSSSFQDNESIEAIKDFSSPIIDTERNEAIRDCSSPLRDTEINEAIKDFSSPLGDTEKIEALSAEIKTLKVMLQEEKQKTDEYERKYVEAQGSSEELRKKLTETEKRVYQLQDSLNRMISSMSSQVAELKTILSTSSRLSSTFRPIARVDVASSNSDSSSTDSDFTFPAPVANPEALSSTQLVVQDVTAAEGSGSGSEKEGSFDDFF 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02829 1132 Gene3D - 254 312 - -
Mepo4g02829 1132 Gene3D - 441 648 - -
Mepo4g02829 1132 FunFam Myosin 2 314 429 - -
Mepo4g02829 1132 Coils Coil 984 1039 - -
Mepo4g02829 1132 Gene3D - 974 1072 - -
Mepo4g02829 1132 Pfam IQ calmodulin-binding motif 810 828 IPR000048 GO:0005515
Mepo4g02829 1132 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
Mepo4g02829 1132 Pfam IQ calmodulin-binding motif 784 803 IPR000048 GO:0005515
Mepo4g02829 1132 Pfam IQ calmodulin-binding motif 860 876 IPR000048 GO:0005515
Mepo4g02829 1132 FunFam unconventional myosin-Va 762 810 - -
Mepo4g02829 1132 SMART iq_5 782 804 IPR000048 GO:0005515
Mepo4g02829 1132 SMART iq_5 858 880 IPR000048 GO:0005515
Mepo4g02829 1132 SMART iq_5 807 829 IPR000048 GO:0005515
Mepo4g02829 1132 SMART iq_5 759 781 IPR000048 GO:0005515
Mepo4g02829 1132 FunFam Myosin heavy chain 254 309 - -
Mepo4g02829 1132 Pfam Myosin N-terminal SH3-like domain 11 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 CDD MYSc_Myo11 78 745 IPR036018 -
Mepo4g02829 1132 SUPERFAMILY Tropomyosin 979 1054 - -
Mepo4g02829 1132 Pfam Myosin head (motor domain) 66 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 MobiDBLite consensus disorder prediction 1077 1097 - -
Mepo4g02829 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 810 888 IPR027417 -
Mepo4g02829 1132 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Mepo4g02829 1132 ProSiteProfiles IQ motif profile. 760 787 IPR000048 GO:0005515
Mepo4g02829 1132 Gene3D Myosin VI head, motor domain, U50 subdomain 314 626 - -
Mepo4g02829 1132 SMART MYSc_2a 58 758 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 Gene3D - 692 758 - -
Mepo4g02829 1132 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 ProSiteProfiles Myosin motor domain profile. 64 757 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 Gene3D - 760 809 - -
Mepo4g02829 1132 Gene3D - 810 863 - -
Mepo4g02829 1132 MobiDBLite consensus disorder prediction 1113 1132 - -
Mepo4g02829 1132 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g02829 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 810 IPR027417 -
Mepo4g02829 1132 ProSiteProfiles IQ motif profile. 808 835 IPR000048 GO:0005515
Mepo4g02829 1132 Gene3D Kinesin motor domain 67 687 IPR036961 -
Mepo4g02829 1132 PANTHER MYOSIN 56 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02829 Mepo-Chr4 37079426 37094127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02829 4 1043 Myosins gene family AT1G54560 61.726 0.0 1371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02829 K10357 - gmx:100803485 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02829 4 37079426 37094127 Mepo4g02829 4 37079426 37094127 ECH