Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02827 ATGGAAGGAAATTACTACCTGAACAGAAACACAAGAGATCATGATCATCATCATCATCATAACTTGGGATTTGAGGAGCATTCATGGGGAACATCATGGCCAGCAAGAAACTATTCTTGTAGTTTTTGCAAAAGAGAGTTTAGGTCAGCTCAAGCTTTAGGTGGACATATGAATGTCCATAGAAGAGATAGGGCAAGATTAAGATCATCATTAATATCTTCTTGGGTTAATTCTGATCAATGCCCTAATAATAATAAACCAAACCTTACCCCTACCATAACTACTCCTTGTTCTTCTCCACTTTATCTCTCTTTATCTTCTCCTTCACCTTCCTTACCTCATACTAGCCATGATGATAAGAAACCAAGATTAACACCTTCTCTATCTCTTCCTCTTTTGAATCCTCAAAGAAGTGAAATCATGATGAGTAAGACCATGAAGAGCTATGAAGAGGTGAAGAAGCAAAATGTTTTGATGAATAATGAGCAAAACATTACATTGGAGTTAGGAATAGGGTTGTTTAAACACCAAGAGGAAAAGTTAGATTTGGAGCTTCATCTCTAG 564 0.367 MEGNYYLNRNTRDHDHHHHHNLGFEEHSWGTSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSWVNSDQCPNNNKPNLTPTITTPCSSPLYLSLSSPSPSLPHTSHDDKKPRLTPSLSLPLLNPQRSEIMMSKTMKSYEEVKKQNVLMNNEQNITLELGIGLFKHQEEKLDLELHL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02827 187 Gene3D Classic Zinc Finger 15 89 - -
Mepo4g02827 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Mepo4g02827 187 PANTHER OS07G0101800 PROTEIN 20 187 - -
Mepo4g02827 187 Pfam C2H2-type zinc finger 38 62 - -
Mepo4g02827 187 SUPERFAMILY beta-beta-alpha zinc fingers 35 64 IPR036236 -
Mepo4g02827 187 SMART c2h2final6 38 60 IPR013087 -
Mepo4g02827 187 MobiDBLite consensus disorder prediction 104 129 - -
Mepo4g02827 187 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02827 Mepo-Chr4 37051248 37051842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02827 30 187 C2H2 Transcription Factor Family AT3G23130 39.326 7.54e-27 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02827 4 37051248 37051842 Mepo4g02827 4 37051248 37051842 ECH