Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02826 ATGGAATTCAGCTACCTTCAAGAAGATTCAAAGAGCTCAAGCGATGAAAACATCGATCGATCATCTGACCAAAACAACGATGATGATCATGATCATCACATGGGAATTGGTAGATCCTATGAGTGTGTGTTTTGCAAAAGAGGTTTCACAACTGCTCAAGCTTTAGGTGGACACATGAACATACATAGAAAAGATAGAGCAAATAACAACAAAAGTGCAACCAAAACCAATTTTGCTCCTCCTAGTTCAAGCAAATTAGTAGTTGATCATGATAACTATGGAGATCTTGGATTTTATTCAACAATTAATCCAAGTCATCTTGCAAGAGGGGGTTATTATTCTTCAATTTCATCCACAACAACTACTCCTGAGGATGTTTGGACAAGATTGGAGGGGTTTGAGCTTGTATACAAATCCATTAAATAA 426 0.3685 MEFSYLQEDSKSSSDENIDRSSDQNNDDDHDHHMGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNNKSATKTNFAPPSSSKLVVDHDNYGDLGFYSTINPSHLARGGYYSSISSTTTTPEDVWTRLEGFELVYKSIK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02826 141 PANTHER OS07G0101800 PROTEIN 19 83 - -
Mepo4g02826 141 MobiDBLite consensus disorder prediction 60 84 - -
Mepo4g02826 141 MobiDBLite consensus disorder prediction 1 33 - -
Mepo4g02826 141 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Mepo4g02826 141 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Mepo4g02826 141 SUPERFAMILY beta-beta-alpha zinc fingers 38 66 IPR036236 -
Mepo4g02826 141 MobiDBLite consensus disorder prediction 12 33 - -
Mepo4g02826 141 Pfam C2H2-type zinc finger 40 64 - -
Mepo4g02826 141 Gene3D Classic Zinc Finger 21 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02826 Mepo-Chr4 37029064 37029988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02826 40 107 C2H2 Transcription Factor Family AT5G43540 47.059 9.32e-15 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g02826 zf-C2H2_6 1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02826 - - gmx:102670484 114.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02826 4 37029064 37029988 Mepo4g02826 4 37029064 37029988 ECH