Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02822 ATGGCTTCTGCAAATGGCTCTAGCCCTAGATCCTCAGGATGTCCATGTGGGGCATGCAAATTTCTCCGTAGAAAGTGTACTTCTGAATGCATATTTGCACCTTATTTTTGTTGTGAACAAGGACCTGCAAGATTTGCAGCCATTCATAAAGTGTTTGGTGCTAGCAATGTTTCCAAGATGCTACTGAATTTACCTGCTCATGATCGTCCTGATGCTGTTGTTGCAATTGCTTATGAAGCTCAAGCTCGTATTATAGATCCTGTTTATGGTTGTGTATCACATATTTTTGCTCTACAACAACAGGTAGCAAGCTTGCAAGCACAGCTGATGCAAGTGAAGGCACAACAAATAATTAGTCAAAGCCTAGAGGAGACAAGGAACTTGGAGAATCAATGGTCAGGGAATGTTGTTAAACAACAATTAATCAATCCATTTTGTCCCACAAATATGAACCCTATATCTCCTAAGAGCTCCCTTGATTCAATTGATTTTAGAAGCTGCAGCATCAATGATGTAATGATCATGCGAGACATACAATGCCAACCTTATTCTAACAAAAGAATGTCAAATGATTTGGGTGAGCATCAAGAAACATCTCTTGGAATGATGGGAAACTATAATTAG 624 0.3926 MASANGSSPRSSGCPCGACKFLRRKCTSECIFAPYFCCEQGPARFAAIHKVFGASNVSKMLLNLPAHDRPDAVVAIAYEAQARIIDPVYGCVSHIFALQQQVASLQAQLMQVKAQQIISQSLEETRNLENQWSGNVVKQQLINPFCPTNMNPISPKSSLDSIDFRSCSINDVMIMRDIQCQPYSNKRMSNDLGEHQETSLGMMGNYN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02822 207 MobiDBLite consensus disorder prediction 187 207 - -
Mepo4g02822 207 Coils Coil 95 115 - -
Mepo4g02822 207 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Mepo4g02822 207 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Mepo4g02822 207 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02822 Mepo-Chr4 36998604 37000287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02822 1 205 AS2 family AT2G42430 48.583 5.73e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo4g02822 LOB 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02822 K13944 - gmx:100801508 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03105 3 41169963 41171406 Mepo4g02822 4 36998604 37000287 PCT