Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02821 ATGGCTGGTTCTAGTTCTGTTTCTTCTGGTTCTCCTTGTGGAGCCTGCAAATTTTTGAGAAGGAAATGTATAAGAGGTTGTGTTTTTGCACCTTATTTTTCTCATGAACAAGGTGCTACACATTTTTCAGCCATTCATAAGGTTTTTGGTGCAAGCAATGTCTCAAAGCTTCTTGCTCATCTCCCTGTAAGTGATCGTTGCGAAGCCGCGGTTACAATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCTATTTATGGATGTGTTTCACATATTTTTGCCCTCCAACAACAGGTGGTCAATTTACAAACACAACTGGCTTATCTCAAAGAACAAGCAGCACAAAATTGTCTCATTAATGCATCTACCAATGAAAACCCTAATGAAAAATCTTCTCTTACTCTCCCTCAAGATCTTCAAACTTGGTTCCATGTGGAAAATTCCAATAATCAGCAACTTGGGCAAGAATTCCTTACCAATAACTTGTCTAATATTTCCTTAACAACACAATATTATGGGAACAATACTCTCAACATGGATCTAGACCCTATGAGGAATTATGAAAATTCAAGAGTCATTGAAGAAAACACTTCATTTTCTAGCTTTGAGGAGAGTACTTCTAATTCCATGGAAACAAACAGGAGGACATGGGGATTTGATGAAGTTGAGGACCTACATTCATTAGCTTTTGGATACAGTTGA 702 0.3775 MAGSSSVSSGSPCGACKFLRRKCIRGCVFAPYFSHEQGATHFSAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQTQLAYLKEQAAQNCLINASTNENPNEKSSLTLPQDLQTWFHVENSNNQQLGQEFLTNNLSNISLTTQYYGNNTLNMDLDPMRNYENSRVIEENTSFSSFEESTSNSMETNRRTWGFDEVEDLHSLAFGYS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02821 233 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 221 - -
Mepo4g02821 233 Coils Coil 92 112 - -
Mepo4g02821 233 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
Mepo4g02821 233 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02821 Mepo-Chr4 36990949 36991807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02821 12 232 AS2 family AT3G58190 51.802 2.34e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo4g02821 LOB 7.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02821 K13945 - gmx:100776678 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02821 4 36990949 36991807 Mepo4g02821 4 36990949 36991807 ECH
Mepo3g03107 3 41187082 41188302 Mepo4g02821 4 36990949 36991807 PCT