Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02813 ATGAAAACTTCTTCAGAAACACCTTCACAATCCTCACACAATACCAGATCCAAAAAACCCAATCTTCGTAGCTCAAAATCTTTATTCAAAGATCCAATTGAACTAACCTCAAAAACCCCAGAAAAATCACTGGAGAAGCCACCACCGATGCGAACCCGTAACCGCGGTGTCGCGCTTTCGATATCGGATATTAGAAAAGTTGCTAAGGGTCTTCAAGATCAGAAAAAACAAAGCAATGAAACGACGTCGTTGAAGGGGAAATCTGCTAGAAGGCAAATTGCATTGGCTTCTCCTCGAAAGAGCCATGAATCATCTAATCTTCCTGAGAAGTATGAGAATTTGGGGGAGTTTTTTGATAGTTTGGATAGTTCAATTAGATTGTTGCGATTAAAAGGATCGATGACTTCATTTAATAATATCAGGCCAAAGATTGAAACTTTAACTGATAGGAGGTTTACACATGCTCATTTGGCTCAGTTGAAGTTTATTTTACCTGAGGCAATTGCTATTAAGAAGTTGCTCGTGTTTGATGAGCGAACTAGTTGTATGAAGCCGGATCTTCATGTTAGTATAAACCCTGATGCAGTTGAGTTTGATGCTAAGTTGTTGTCTGAATCTGGGACTATGTCTCTGAGGAAGTTGTTTTGTGTGCGACTCAATGAGTTTTGGAAATCCCACCCAGAGGGTGATGAAGTTCCAGAGGAAATGCTGCCTGAGCCATTCAGTCGTCCAAAGCAAGATCCTCTTGTACACATGATGAAACCTCCCTCATCATTCTCTGCAGTGAAATTATCTGTTGCACGTGCTTCAAGTGACATTGCGGATAATACAGACCTTGCTAACTCAGAAAGTCATGTGTCAGTGCCCGCTGAGACATTAGTTGAAGCTCTTAACCAGAAGCCAGCAGTTGCCTCTCATATGCCTCAATCTTTCAGAAGGCGGTTTTCTCAGAAATTAAAGGAAAATGTACAGCCACAACTTCCATCTGATTCATTCCAACCCTTAGTGGTGCCAGTTTCAGAGTCAAGCTTGAGGATAAATTCCACCTCTGAGGTCCCTAAAATATCCCCACCCGAGTTGGTTACAGAATCATCCAGTAGTGAAGCACATCCTGCGATTCATGGTTCTTCAGACTGCTTCACACCATCCAGAGTTACACTAGCTACACCTAGCAAAACCATTGAGTATACAGAAAGCAAAGACGGCTCCTTCAAAACTGTTGATGCTATGTCAACTCCAGCTAAATTTGTATCTACTCCAGCCAGGCTGATGTCAGCTACACCTGCATTGAAGCCGCCTAAAAGAAGTTTTATGACCCCAGATGACAACTCTACCAGCTCGCCGGACAAGTTGGTTAAGCGCCCACCTCGTTCAAGGTCATTGAAATTTGACACTCCTATGAAAAATGAAAATGATGCTGGCGGTTTGTCAATTGATGATGACATTTTTGATATCCTCCCGGATAATCTTCTCCATTCGATTCAGGAAAAAGAAAGAATGGCAATGGAGGAAAGGGATCCAGCTATCTCACAAGCTAAGAAGCGGAAAAAAATTATCGCCAGCCTCCCTAAGCTCTTCAACATGATTCACATGATGTTTCATTCAATAAACCGTTCTGTTATCACAAAAGAGGAGCTGATGAGCAAGATAATCTCAAGTCACCGTGATATTGTTGATAGAAGTGAAGTTGAAGAACAGTTGCATTTGTTGTTAGAATTAGTTCCTGAATGGATTTCTGAGAAGGTGGCCTCTAGTGGAGATATGCTAGTCTCCGTAAACAAAATGTTGAACCCTGAATCCTTAAGAGCATCACTTGAAGAAGCAAAATGA 1830 0.4169 MKTSSETPSQSSHNTRSKKPNLRSSKSLFKDPIELTSKTPEKSLEKPPPMRTRNRGVALSISDIRKVAKGLQDQKKQSNETTSLKGKSARRQIALASPRKSHESSNLPEKYENLGEFFDSLDSSIRLLRLKGSMTSFNNIRPKIETLTDRRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFDAKLLSESGTMSLRKLFCVRLNEFWKSHPEGDEVPEEMLPEPFSRPKQDPLVHMMKPPSSFSAVKLSVARASSDIADNTDLANSESHVSVPAETLVEALNQKPAVASHMPQSFRRRFSQKLKENVQPQLPSDSFQPLVVPVSESSLRINSTSEVPKISPPELVTESSSSEAHPAIHGSSDCFTPSRVTLATPSKTIEYTESKDGSFKTVDAMSTPAKFVSTPARLMSATPALKPPKRSFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMKNENDAGGLSIDDDIFDILPDNLLHSIQEKERMAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSKIISSHRDIVDRSEVEEQLHLLLELVPEWISEKVASSGDMLVSVNKMLNPESLRASLEEAK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02813 609 PANTHER DNA REPLICATION FACTOR CDT1 8 609 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mepo4g02813 609 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 348 372 - -
Mepo4g02813 609 Pfam DNA replication factor Cdt1 C-terminal domain 489 581 IPR032054 -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 1 108 - -
Mepo4g02813 609 SMART CDT1_2 107 239 IPR014939 -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 452 466 - -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 74 88 - -
Mepo4g02813 609 Gene3D - 480 609 IPR038090 -
Mepo4g02813 609 CDD Cdt1_m 90 240 IPR014939 -
Mepo4g02813 609 FunFam CDT1-like protein a chloroplastic 479 609 - -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 35 49 - -
Mepo4g02813 609 SUPERFAMILY "Winged helix" DNA-binding domain 102 241 IPR036390 -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 423 475 - -
Mepo4g02813 609 Pfam DNA replication factor CDT1 like 107 197 IPR014939 -
Mepo4g02813 609 CDD Cdt1_c 485 606 IPR032054 -
Mepo4g02813 609 MobiDBLite consensus disorder prediction 348 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02813 Mepo-Chr4 36925982 36929263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02813 39 245 Core DNA Replication Machinery Family AT2G31270 50.926 9.97e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02813 K10727 - cave:132166775 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02813 4 36925982 36929263 Mepo4g02813 4 36925982 36929263 ECH