Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02802 ATGGAAGAGGAAAATTCAAATGAGAAGAAACAAGAGTCACCAAAAGAAATTCGATACCGAGGAGTTAAGCGTCGTCCATGGGGAAAGTTTGCGGCTGAGATTCGGGACCCAGCTAGACGCGGTGCACGCGTGTGGCTAGGCACATTTCTCACGGCGGAGGAAGCTGCAAGAGCTTATGATCGTGCTGCTTTTGAGATGAGAGGTGCTTTAGCAATTCTCAACTTTCCACATGAGTATCCAAATGTTAACTCCTCTTCATCATCATTAGCACCTAATTCATCTTCAGCTTCATGCTATGAATCATCATCAACGTCAAATTACCAAAGTGAGCATGGGAAACAAGTCATTGAATTTGAGTATTTGGATGATAAATTGTTAGAGGATCTTCTTGATTGTGATGAAAATGAAACCACTCGTAAAAACTTGCCAAAGTAG 435 0.4207 MEEENSNEKKQESPKEIRYRGVKRRPWGKFAAEIRDPARRGARVWLGTFLTAEEAARAYDRAAFEMRGALAILNFPHEYPNVNSSSSSLAPNSSSASCYESSSTSNYQSEHGKQVIEFEYLDDKLLEDLLDCDENETTRKNLPK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02802 144 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Mepo4g02802 144 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Mepo4g02802 144 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g02802 144 PANTHER DNA-BINDING DOMAIN 7 136 IPR044808 GO:0003700|GO:0009873
Mepo4g02802 144 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Mepo4g02802 144 MobiDBLite consensus disorder prediction 82 110 - -
Mepo4g02802 144 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mepo4g02802 144 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Mepo4g02802 144 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mepo4g02802 144 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mepo4g02802 144 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Mepo4g02802 144 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02802 Mepo-Chr4 36794466 36794993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02802 15 134 AP2-EREBP Transcription Factor Family AT3G23230 62.810 3.09e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02802 AP2 5.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02802 - - gmx:100810414 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02802 4 36794466 36794993 Mepo4g02802 4 36794466 36794993 ECH
Mepo4g02802 4 36794466 36794993 Mepo3g03115 3 41254720 41255139 PCT