Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02801 ATGCATACGATGAGTAGCTCTTTTTTCCAAAACCCAGATTTGGAAATGTTGCAACAAGATCCTACTAATATTCTGTGTGAACCATTTCATCATGACCCTAATATTCATGATTATCTTTCCTTTGACATGGTTGACCAACAAGGACCAACAAAAACTGAACCAAATCATGAACTAGTGAAGAACTTTGAAACTAAAGAAGAAAGATCATATATAGGTGTGAGGAAGAGACCTTGGGGGAAATTTGCTGCAGAGATCAGAGATACAACAAGAGGAGGAAGAAGAGTTTGGCTAGGAACATTTGATAGTGCTGAAGATGCTGCTTTAGCTTATGATCAAGCTGCATTTTCAATGAGAGGTAATAATGCTGTGCTCAACTTTTCTGTCCAAAGGGTCAAAGAATCTTTGCAAGAGATTCAATATGATTGCAGAAAAGGATCTTCACCTGCACTTGCACTCAAGGAGAGACGCTATAATCAAAGAAAGATGTCATCAAAAGGTGTAAAGAATAAAGCAGGGAAACAAGATCAATCAGAAGGACCAAGTGTTTTGGTGGTACAAGACTTGGGAGTTGAATATCTTGAGCAACTTCTATCCATATCTGATCAAAGTACTAGCACTAGCAGTTACTTCAAATCAACTTTTTAA 645 0.3752 MHTMSSSFFQNPDLEMLQQDPTNILCEPFHHDPNIHDYLSFDMVDQQGPTKTEPNHELVKNFETKEERSYIGVRKRPWGKFAAEIRDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGNNAVLNFSVQRVKESLQEIQYDCRKGSSPALALKERRYNQRKMSSKGVKNKAGKQDQSEGPSVLVVQDLGVEYLEQLLSISDQSTSTSSYFKSTF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02801 214 FunFam Ethylene-responsive transcription factor 2 68 128 - -
Mepo4g02801 214 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
Mepo4g02801 214 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Mepo4g02801 214 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Mepo4g02801 214 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Mepo4g02801 214 MobiDBLite consensus disorder prediction 158 179 - -
Mepo4g02801 214 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Mepo4g02801 214 CDD AP2 70 126 IPR001471 GO:0003700|GO:0006355
Mepo4g02801 214 PANTHER DNA-BINDING DOMAIN 57 203 IPR044808 GO:0003700|GO:0009873
Mepo4g02801 214 Gene3D AP2/ERF domain 69 129 IPR036955 GO:0003700|GO:0006355
Mepo4g02801 214 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02801 Mepo-Chr4 36775645 36776289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02801 65 203 AP2-EREBP Transcription Factor Family AT3G23240 58.273 3.36e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02801 AP2 5.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02801 K14516 - gmx:100527364 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02801 4 36775645 36776289 Mepo4g02801 4 36775645 36776289 ECH
Mepo4g02801 4 36775645 36776289 Mepo3g03117 3 41264260 41264868 PCT