Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02800 ATGGAAATGCTGCAACAAAGCCCTTCAGAAATTCCCTTCGAATTGTTAGGTATTCATGATTGTCTTACCTTTGATATGGTTGATTTCTCATCGAGTTCGCAGACAATAATTACCGAAAACGAGCCAAAACAATCAATGTTGAAGTCATCTGAAGCTAAACAAGTAATGCAGAACAATTATAAGATTGATCAAAAGTCATATATAGGTGTTAGGAAAAGACCTTGGGGAAAATATGCTGCAGAAATCAGAGATACAACTAGAGGAGGAAGAAGGGTTTGGCTAGGAACATTTGACAGTGCTGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTTTCAATGAGAGGTAACAATGCTTTCCTCAATTTTTCTTTCCAAAGAGTCAAAAAATCTTTGCAAGAGATTCAATATGATTGCAGAAAAGGGTCTTCACTTGCACTTGCACTCAAAGAGAGACACTACACCCAAAGAAAATTGAGGTCATCATCAAAAAGTAAAAAGGGTAATGCAGGGAAATTTCAAGAAACGGCAGAGGGATCATCAAGTACTGTGTTGGTGTTAGAGGATTTGGGAGTTGAATATCTTGAGAAACTTCTAAGTATGTCAGATAATCAAAGTCCAAGCTCAAAACCAATTTCTAATGATTAA 648 0.3688 MEMLQQSPSEIPFELLGIHDCLTFDMVDFSSSSQTIITENEPKQSMLKSSEAKQVMQNNYKIDQKSYIGVRKRPWGKYAAEIRDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGNNAFLNFSFQRVKKSLQEIQYDCRKGSSLALALKERHYTQRKLRSSSKSKKGNAGKFQETAEGSSSTVLVLEDLGVEYLEKLLSMSDNQSPSSKPISND 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02800 215 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Mepo4g02800 215 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Mepo4g02800 215 MobiDBLite consensus disorder prediction 157 181 - -
Mepo4g02800 215 MobiDBLite consensus disorder prediction 166 181 - -
Mepo4g02800 215 PANTHER DNA-BINDING DOMAIN 47 203 IPR044808 GO:0003700|GO:0009873
Mepo4g02800 215 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Mepo4g02800 215 SMART rav1_2 66 130 IPR001471 GO:0003700|GO:0006355
Mepo4g02800 215 FunFam Ethylene-responsive transcription factor 2 65 125 - -
Mepo4g02800 215 ProSiteProfiles AP2/ERF domain profile. 66 124 IPR001471 GO:0003700|GO:0006355
Mepo4g02800 215 SUPERFAMILY DNA-binding domain 66 125 IPR016177 GO:0003677
Mepo4g02800 215 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Mepo4g02800 215 Gene3D AP2/ERF domain 65 126 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02800 Mepo-Chr4 36769435 36770257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02800 64 204 AP2-EREBP Transcription Factor Family AT3G23240 56.028 3.15e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02800 AP2 4.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02800 K14516 - gmx:100811486 201.445