Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02798 ATGAGTCACTCTTTTTTCCAGAACCCAGATATGGAAATGCTGCAAGACCCTTCAGAAATTTCATTCGAATCATTTGGCATTAATGATGATCCAGTTCATGATTCTCTTTCCTTCGATATGGTTGATTTCTCATATAGTTCAAATGCACCATCAGAAAGTAAGTCAATGTTGAAGTCATCGTCTGAAGCAAAACAAGAACAGAATAAGATTGATCAGAAGCCATATATAGGTGTGAGGAAAAGACCTTGGGGGAAATATGCTGCAGAAATCAGAGACACGACAAGGGGTGGCAAAAGGGTTTGGTTAGGAACTTTTGATAGTGCTGAAGATGCTGCTTTAGCTTATGATCAAGCTGCATTTTCAATGAGAGGTAATAATGCTGTGCTCAACTTTTCTGTCCAAAGGGTCAAAGAATCTTTGCAAGAGATTCATTATGATTGTTGTACTATGGAGTCTTCTTCACCTGCACTTGCACTCAAAGAGAGAAACTATAACCAAAGAAAATTGATGTCAGCATCAAAAGGTACTAAGAAGGGCAAGGGGAAGTTACAAGAATCAGAGGGATCATCGAGTGTGTTGGTGTTAGAGGATTTAGGAGTTGAATATCTTGAGCAACTTCTAACCATGTCAGATAATCAAAGTACAAGCTCGAGCAACTTGTAG 663 0.3891 MSHSFFQNPDMEMLQDPSEISFESFGINDDPVHDSLSFDMVDFSYSSNAPSESKSMLKSSSEAKQEQNKIDQKPYIGVRKRPWGKYAAEIRDTTRGGKRVWLGTFDSAEDAALAYDQAAFSMRGNNAVLNFSVQRVKESLQEIHYDCCTMESSSPALALKERNYNQRKLMSASKGTKKGKGKLQESEGSSSVLVLEDLGVEYLEQLLTMSDNQSTSSSNL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02798 220 CDD AP2 75 131 IPR001471 GO:0003700|GO:0006355
Mepo4g02798 220 PANTHER DNA-BINDING DOMAIN 53 211 IPR044808 GO:0003700|GO:0009873
Mepo4g02798 220 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Mepo4g02798 220 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Mepo4g02798 220 MobiDBLite consensus disorder prediction 47 63 - -
Mepo4g02798 220 FunFam Ethylene-responsive transcription factor 2 73 133 - -
Mepo4g02798 220 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Mepo4g02798 220 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Mepo4g02798 220 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Mepo4g02798 220 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Mepo4g02798 220 MobiDBLite consensus disorder prediction 47 74 - -
Mepo4g02798 220 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02798 Mepo-Chr4 36701156 36701969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02798 72 215 AP2-EREBP Transcription Factor Family AT3G23240 56.463 7.05e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02798 AP2 5.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02798 K14516 - gmx:100812017 233.802