Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02797 ATGGAGGGAGATCATAAATTAGTTTCAAATTCAACAAATGGAAATGGAAATTCAGATCAAATAAAGTATAGAGGAATTCGTAGGAGACCATGGGGAAAATTTGCAGCAGAAATTCGTGACCCAACAAGGAAAGGGACAAGAATATGGCTTGGAACATTTGATACTGCTGAACAAGCTGCAAGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCATAGAGCTATTCTCAATTTCCCTAATGAATATCAAGCTCCTAATTCATCTTCTTCATTACCTATGCCTCTTACTATGCCTCCACCATCTTCTTCTAATCCTCCTCCTCCTTCTTCCTCTTTTTCTTCTTACTCTGTTGATGATGGTTTTGATGAGCTTGAATTCTTGGATAATAAGTTGCTTCAAGAATTCCTTCAAGATGGCACACATTAG 429 0.38 MEGDHKLVSNSTNGNGNSDQIKYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQAPNSSSSLPMPLTMPPPSSSNPPPPSSSFSSYSVDDGFDELEFLDNKLLQEFLQDGTH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02797 142 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g02797 142 MobiDBLite consensus disorder prediction 81 117 - -
Mepo4g02797 142 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Mepo4g02797 142 PANTHER DNA-BINDING DOMAIN 17 108 IPR044808 GO:0003700|GO:0009873
Mepo4g02797 142 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Mepo4g02797 142 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g02797 142 MobiDBLite consensus disorder prediction 93 108 - -
Mepo4g02797 142 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Mepo4g02797 142 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Mepo4g02797 142 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Mepo4g02797 142 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Mepo4g02797 142 Gene3D AP2/ERF domain 21 81 IPR036955 GO:0003700|GO:0006355
Mepo4g02797 142 Pfam AP2 domain 22 73 IPR001471 GO:0003700|GO:0006355
Mepo4g02797 142 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02797 Mepo-Chr4 36682441 36683379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02797 20 137 AP2-EREBP Transcription Factor Family AT3G23230 56.780 1.24e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02797 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02797 - - cam:101502737 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03118 3 41274495 41274911 Mepo4g02797 4 36682441 36683379 PCT