Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02796 ATGTCCACTTTTTTAGTCCCACAAGACATGGATTTTGATTCTTCATTCTTCCAATTCCAATACCAAAACCTTGACACTTCATTTGAAAATTCATCTTCTTTTTTAGAATCCTTTTCATTGGACGATTTCTTTTTCTTCAATGAAGACAACAACATTAACAATAACACCTTTTCCACGAATTTCACTGACCAAAACACACTAACATTCAAAGAATCATCAACCTCTGATTCCAACTCGAACACTTCAAACTCTCAAGTCAGCACGGAATCACAAGAAGTTTCATCCAATTCAACTCCATTGGTACAATCATCATCACCTAAGAGGCCATATAGAGGAGTTAGGAGAAGACCTTGGGGAAAATTCGCGGCCGAAATAAGAGACTCAACTAGAAATGGTGTTAGAGTTTGGATTGGTACATTTGATACAGCTGAAGCAGCAGCTTTAGCTTATGATCAAGCAGCTTTATCAACAAGAGGTTCAATGGCAGTGTTGAATTTTCCTGAACATGTTGTGAGAGAATCATTGAAAGATATGGTAATTAACAAGTCTTGGGAAAAAGATGGTACTTCTCCTGTTTTGGCACTCAAGAGGAAACACACTTTGAAAAGAAAGTCTAAAGCAAGTAATTGCAAAAAGACCAAAAGGGTAGAAAGGGAAATGGAGAATAACATTGTTTCACAAAATGTGTTGGTGTTGGAAGATTTGGGTTCTGAATATTTGGACCAACTTCTTAGCTTGACTTCTTCTTCTCAAGACTTTTTCTAG 765 0.3673 MSTFLVPQDMDFDSSFFQFQYQNLDTSFENSSSFLESFSLDDFFFFNEDNNINNNTFSTNFTDQNTLTFKESSTSDSNSNTSNSQVSTESQEVSSNSTPLVQSSSPKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEHVVRESLKDMVINKSWEKDGTSPVLALKRKHTLKRKSKASNCKKTKRVEREMENNIVSQNVLVLEDLGSEYLDQLLSLTSSSQDFF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02796 254 Gene3D AP2/ERF domain 109 169 IPR036955 GO:0003700|GO:0006355
Mepo4g02796 254 CDD AP2 110 169 IPR001471 GO:0003700|GO:0006355
Mepo4g02796 254 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Mepo4g02796 254 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Mepo4g02796 254 MobiDBLite consensus disorder prediction 69 105 - -
Mepo4g02796 254 PANTHER DNA-BINDING DOMAIN 73 246 IPR044808 GO:0003700|GO:0009873
Mepo4g02796 254 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Mepo4g02796 254 ProSiteProfiles AP2/ERF domain profile. 109 167 IPR001471 GO:0003700|GO:0006355
Mepo4g02796 254 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Mepo4g02796 254 MobiDBLite consensus disorder prediction 69 113 - -
Mepo4g02796 254 SMART rav1_2 109 173 IPR001471 GO:0003700|GO:0006355
Mepo4g02796 254 FunFam Ethylene-responsive transcription factor 2 108 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02796 Mepo-Chr4 36662068 36663073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02796 80 245 AP2-EREBP Transcription Factor Family AT3G23240 52.410 3.77e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02796 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02796 K14516 - gmx:100784784 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02796 4 36662068 36663073 Mepo4g02796 4 36662068 36663073 ECH
Mepo3g03119 3 41294838 41295976 Mepo4g02796 4 36662068 36663073 PCT