Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02795 ATGGATTTTGATTCTTCATTCTTCCAATTCCAATACCAAAACCTTAACACTTCATTTTCAAATACCTCAGCTTTATTAGAATCCTTTTCATGGGAAGATTTCTTTAGCTTCAATGAAGACAACAACAAAACTCTTCCCATGAACCAAAGTGCACAAATATTCAAAGAATCATCAACCTCTTATTCCAATTCCAGCACTTCAAACTCTCAAATCAGCAATGAATCACAAGAAGTTTCATCCAATTCAACACAATTAGTACAATTATCATCACCTAAGAAGTCATACAAAGGAGTAAGGAGAAGACCTTGGGGAAAATTCGCAGCCGAAATAAGAGACTCAACAAGAAATGGTGTTAGAGTTTGGATTGGTACATTTGATACAGCTGAAGCAGCAGCTTTAGCTTATGATCAAGCAGCTTTATCAACAAGAGGATCAATGGCAGTGTTGAATTTTCCTGAACATGTTGTGAGAGAATCATTGAAAGATATGGTGATTAACAAGTCTTGGGAAAAAGATGGTTCTTCTCCTGTTTTAGCACTCAAGAGGAAACACACTTTGAAAAGAAAGTCTAAAGCAAGTAATTGCAAAAAGACCAAAAGGGTAGAAAGGGAAATGGAGAATAATATTGTTTCACAAAATGTGTTGGTGTTGGAAGATTTGGGTTCTGAATATTTGGACCAACTTCTTAGCTTGAGTACTTATCAAGTCATTTGTTAG 717 0.3543 MDFDSSFFQFQYQNLNTSFSNTSALLESFSWEDFFSFNEDNNKTLPMNQSAQIFKESSTSYSNSSTSNSQISNESQEVSSNSTQLVQLSSPKKSYKGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEHVVRESLKDMVINKSWEKDGSSPVLALKRKHTLKRKSKASNCKKTKRVEREMENNIVSQNVLVLEDLGSEYLDQLLSLSTYQVIC 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02795 238 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Mepo4g02795 238 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Mepo4g02795 238 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
Mepo4g02795 238 CDD AP2 93 154 IPR001471 GO:0003700|GO:0006355
Mepo4g02795 238 FunFam Ethylene-responsive transcription factor 2 93 153 - -
Mepo4g02795 238 SUPERFAMILY DNA-binding domain 94 153 IPR016177 GO:0003677
Mepo4g02795 238 ProSiteProfiles AP2/ERF domain profile. 94 152 IPR001471 GO:0003700|GO:0006355
Mepo4g02795 238 SMART rav1_2 94 158 IPR001471 GO:0003700|GO:0006355
Mepo4g02795 238 Gene3D AP2/ERF domain 93 154 IPR036955 GO:0003700|GO:0006355
Mepo4g02795 238 MobiDBLite consensus disorder prediction 56 91 - -
Mepo4g02795 238 PANTHER DNA-BINDING DOMAIN 58 230 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02795 Mepo-Chr4 36656850 36657765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02795 65 232 AP2-EREBP Transcription Factor Family AT3G23240 53.571 1.15e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02795 AP2 6.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02795 K14516 - gmx:100784784 258.455