Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02784 ATGCCGTCGCTCCACTCACCAGGCAAAATCCTTCGCCTGGAACTCTCAAACTTCAAATCCTACAAAGGATTCCAACAAATTGGCCCTTTCTACGACTTCACCGCTATCATCGGCCCTAACGGCGCCGGAAAATCCAATCTCATGGATGCTATCAGTTTCGTCCTCGGCGTTCGCACCAACCAACTCCGTGGCGCTCAGTTGAAAGATCTCATCTACGCTTTCGATGATTGTGAGAAAGAACAGAAAGGTCGAAGAGCTTTCGTGAGATTGGTTTATCAGCTTGCGAATGAATCCGAAATCAAATTCACTAGAACTATTACTTCTGCTGGTGCTAGTGAGTATCGGATTGATGATAGTGTTGTTAATTGGGATGTTTACAATGCCAGACTCAAATCGTTGGGGATTCTTGTCAAAGCACGCAATTTCTTGGTTTTTCAGGGTGATGTGGAGTCGATTGCGTCGAAGAATCCGAAGGAGCTCACTGGGCTTATTGAGCAGATATCTGGATCTGATGAGCTGAAGAGAGATTATGAGCAGTTTGAAGAAGAGAAAGCTTCTGCTGAAGAGAAATCGGCGCTTGTTTATCAGAAGAAGAAGACGATGGTGATGGAGAGGAAGCAGAAGAAAGAACAGAAGGAAGAGGCGGAGAAACATATTCGCTTGCAGGATCAATTGAAATCTATGAAGAAGGAACATTTTTTGTGGCAGTTGTTCAATATAGAAAATGATGTTGTTAAAACAACCGAGGAACTTGAAGCTGATAAAAGAAGCCGTGAAGGTGTTATTGAAGAATTAGAAAATTTTGAACATGAAGCTGGCAAAAAGAAAAAAGAGCAAGCCAAGTATCTGAAAGAAGTTATGCTACGTGAGAAGAAAATAGCTGAGAAAAGCATTAGACTTGACAAGACTCAACCTGAGCTTCTGAAGTTAAAGGAGGAAATGTCTCGTATCAGTACAAAAATTAAAAAAGGGAAGAAAGAGCTTGGCAAAAAAAGGGAAGAGCAAAAGGGGCATGCCAAAGATATAGCAGATCTACAGAGTGGTATTGAGGATCTTACAGGGAAAATGAAAGACCTAAAGGAAAAGGGTCGAAATGTTGGCGATCAGATTCAGTTAGATGATAATGACTTGCAAGAATATTTTAGAATAAAAGAGGAAGCTGGGATGAAAACCGCAAAGCTTAGAGAGGAAAAAGAACTTCTAGATAGGCAGCAACATGCTGATAGTGAAGCTCAAAATAATTTGGAAGAAAATCTTCAACAATTAAAACACCGGGAGGCTGAGCTGGATTCACAGGAAAAGCAGATGCGAGAAAGGCTTGAAAAAATTCTTGATAGTTCTGCAAAGAATAAGGATGAAGTTGAAGACTTGAATAGACAACTGCGTATGATGAAAGAAGAACATAATGCATCCAAGAGAAAGTATGATAACTTGAAGATAAAAATTGGTGAAATAGAAAATAAACTACGTGATCTGAAGGCAGATCGCTATGAAAACGAGAGAGATGCTAAATTGTCTCAGGCTGTGGCAACTCTGAAACGCTTGTTTCAAGGAGTCCATGGTCGCATGACTGATCTTTGTAGGCCAACACAGAAGAAGTATAACCTAGCCGTTACTGTTGCTATGGGTAAATTAATGGATGCAGTTGTTGTGGAGGATGAAAAGACCGGGAAGGAATGCATCAAGTATTTAAAAGAGCAGAGGCTTCCTCCCCAGACATTTATTCCTCTACAATCTATTCGAGTGAAGCAAATAATGGAAAGATTACGCTCGTTAGGGGGTACAGCAAAACTGGTTTTCGATTGCAAGTTTGATCCCTCCTTGGAGAAGGCAATTCTATTTGCTGTTGGGAATACTCTTGTTTGTGAAGACCTTGAGGAAGCCAAAATTTTAAGCTGGAGCGGGGAGAGGTTTAAAGTTGTAACCGTGGATGGAATTTTGCTGACAAAATCCGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAACAGTGGGATGACAAGATACTTGAAGGATATGTCAAAAAGAAAGAGGATTATGAGTTGGAGTTGGAAGGGATAGGATCAATAAGAGATATGCGCGTTAAAGAGTCTGAAACAGAGGGGAAAAAAAGTGGACTTGAGAAGAAAATTCAATATGCTGAGATTGAAAAGAAAAGCATCGAAGATAAACTTTCAAATTTTAGTCGTGAAAAGGGGACCATCAAAGAAGAAATTAAACGTATTAGTCCAGAACTGAAGAAGTTAAGAGATGCTGTTGAAAAGAGGAATAAAGAATTACATACTCTTGAGAAGAGGATAAATGAAATCACTGATCGGATTTACAAAGAATTCAGCAAGTCAGTTGGGGTTGCAAACATTCGCGAGTATGAAGAAAATCGACTCAAGGATGCTCAAAGTCTACAAGAGGAGAGGCTGAAACTGAGTAGCCAACTTTCGAAATTAAAATATCAGTTGGAGTATGAACAAAATCGGGACATGAGTTCACGAATTCAAGAATTGGAATCTTCCGTAAGTGCTTTGGAGATTGATTTAAAAGGAGTACATACCAAAGAGGCTGAAGCAAAGTTAGCAGCAGAGAAAGTTACTGAAGAGATCAATCATTTAAAAGATGAAGTTAAAGAGTGGAAATCAGAGTCAGAGGATCGTGAAAAGGAAATCCAGGAATGGAAGAAGAAGGCTTCTGCAGCCACAACAAGCTTAGCCAAACTTAATCGTTTGATTAGCTCAAAGGAGGCACAGATTGAGCAGTTGATTGGGCAAAAGCAGGAAATCGTAGAAAAGTGTGAACTAGAGCAAATTAGCCTTCCAATCATACCAGATCCTATGGATACTGATACTTCAACACCGGGTCCAGTTTTTGACTTTGATAAGCTCAGTAGAACACTAAAAGATAGGAGACAATCTGACAGGGATAAAATAGAGGTAGACTTTAAGCAAAAAATGGATGCATTGATATCTGAGATCGAAAGAACAGCACCAAATTTGAAGGCATTGGACCAGTATGAGGCTCTGCTTGGAAAAGAAAGAGCTGTAACTGAAGAGTTTGAAGCTGTCAGGAAAGAAGAGAAGGAAAAAGCCGATAGATTCAATGAAGTAAAGCAGAAGAGATATGATAAGTTCATGGATGCTTTCAACCATATCGCTGGTAATATAGATAAAATTTACAAACAACTTACAAAGAGCAACACACATCCTCTGGGTGGAACAGCATATCTAAATTTGGAAAATGAAGACGATCCATTTCTGCACGGCATGAAGTACACTGCTATGCCACCAACAAAGCGGTTCCGCGACATGGAACAACTATCTGGTGGCGAAAAGACTGTTGCTGCGCTTGCATTGCTGTTCTCCATCCACAGTTATAGGCCTTCACCATTTTTCATACTGGATGAAGTTGATGCTGCATTGGACAACTTGAATGTAGCAAAGGTTGCTGGCTTCATTCGTTCAAAATCTTGTGAAGGAGCAAGGACTAATCAGGATGCTGATGCCGGATCTGGTTTTCAGAGTATTGTAATATCTCTGAAAGACAGCTTCTATGACAAAGCTGAAGCGTTAGTTGGGGTTTACAGGGACTCTGAAAGAGGCTGTTCGAGTACTCTCTCATTTGATCTACTCAAATATCGGGAGTCCTAA 3651 0.404 MPSLHSPGKILRLELSNFKSYKGFQQIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTNQLRGAQLKDLIYAFDDCEKEQKGRRAFVRLVYQLANESEIKFTRTITSAGASEYRIDDSVVNWDVYNARLKSLGILVKARNFLVFQGDVESIASKNPKELTGLIEQISGSDELKRDYEQFEEEKASAEEKSALVYQKKKTMVMERKQKKEQKEEAEKHIRLQDQLKSMKKEHFLWQLFNIENDVVKTTEELEADKRSREGVIEELENFEHEAGKKKKEQAKYLKEVMLREKKIAEKSIRLDKTQPELLKLKEEMSRISTKIKKGKKELGKKREEQKGHAKDIADLQSGIEDLTGKMKDLKEKGRNVGDQIQLDDNDLQEYFRIKEEAGMKTAKLREEKELLDRQQHADSEAQNNLEENLQQLKHREAELDSQEKQMRERLEKILDSSAKNKDEVEDLNRQLRMMKEEHNASKRKYDNLKIKIGEIENKLRDLKADRYENERDAKLSQAVATLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKLMDAVVVEDEKTGKECIKYLKEQRLPPQTFIPLQSIRVKQIMERLRSLGGTAKLVFDCKFDPSLEKAILFAVGNTLVCEDLEEAKILSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKILEGYVKKKEDYELELEGIGSIRDMRVKESETEGKKSGLEKKIQYAEIEKKSIEDKLSNFSREKGTIKEEIKRISPELKKLRDAVEKRNKELHTLEKRINEITDRIYKEFSKSVGVANIREYEENRLKDAQSLQEERLKLSSQLSKLKYQLEYEQNRDMSSRIQELESSVSALEIDLKGVHTKEAEAKLAAEKVTEEINHLKDEVKEWKSESEDREKEIQEWKKKASAATTSLAKLNRLISSKEAQIEQLIGQKQEIVEKCELEQISLPIIPDPMDTDTSTPGPVFDFDKLSRTLKDRRQSDRDKIEVDFKQKMDALISEIERTAPNLKALDQYEALLGKERAVTEEFEAVRKEEKEKADRFNEVKQKRYDKFMDAFNHIAGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGMKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARTNQDADAGSGFQSIVISLKDSFYDKAEALVGVYRDSERGCSSTLSFDLLKYRES 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02784 1216 Coils Coil 708 735 - -
Mepo4g02784 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 273 IPR027417 -
Mepo4g02784 1216 Coils Coil 856 932 - -
Mepo4g02784 1216 Gene3D - 578 659 - -
Mepo4g02784 1216 Gene3D - 495 577 - -
Mepo4g02784 1216 SUPERFAMILY Smc hinge domain 481 666 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo4g02784 1216 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Mepo4g02784 1216 Coils Coil 828 848 - -
Mepo4g02784 1216 Coils Coil 307 327 - -
Mepo4g02784 1216 Coils Coil 412 495 - -
Mepo4g02784 1216 Coils Coil 342 362 - -
Mepo4g02784 1216 Coils Coil 170 231 - -
Mepo4g02784 1216 FunFam Structural maintenance of chromosomes 1A 9 224 - -
Mepo4g02784 1216 Pfam RecF/RecN/SMC N terminal domain 10 1197 IPR003395 -
Mepo4g02784 1216 Coils Coil 750 777 - -
Mepo4g02784 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 1159 IPR027417 -
Mepo4g02784 1216 MobiDBLite consensus disorder prediction 321 340 - -
Mepo4g02784 1216 Coils Coil 251 278 - -
Mepo4g02784 1216 Coils Coil 802 822 - -
Mepo4g02784 1216 PIRSF SMC 8 1214 IPR024704 GO:0005524|GO:0016887
Mepo4g02784 1216 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 1215 - -
Mepo4g02784 1216 SMART SMC_hinge_2 517 632 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo4g02784 1216 Pfam SMC proteins Flexible Hinge Domain 517 631 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo4g02784 1216 Gene3D - 948 1215 IPR027417 -
Mepo4g02784 1216 Gene3D - 8 209 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02784 Mepo-Chr4 36535114 36552683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02784 6 92 Structural Maintenance of Chromosomes family AT5G07660 36.170 1.36e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02784 K06636 - gmx:100791953 1865.89