Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02775 ATGGGTCTTAGAGATGTCGGTGCTTCACTTCCCCCTGGCTTTCGATTTTATCCTAGTGATGAAGAGTTGGTCCTTCATTACCTTTACAAAAAAATCACAAATGAGGATGTTCTCAAGGGTACCTTGGAGGAAATTGACTTGCATACATGCGAGCCTTGGCAACTTCCTGAGGTGGCTAAGCTCAACGCAACTGAATGGTACTTCTTTAGCTTTCGTGACCGTAAATATGCCACAGGTTTTAGAACCAATAGGGCTACGACATCTGGCTATTGGAAAGCAACAGGAAAGGATCGAACAGTGTTTGATCCAATCACCCATGAGGTTGTAGGGATGAGGAAAACTTTAGTGTTCTATAGGAATAGAGCTCCAAATGGAATCAAAACAGGTTGGATCATGCATGAGTTTAGGTTGGAGACCCCACATATGCCACCTAAGGAAGACTGGGTTTTGTGTAGAGTATTTCATAAAGGCAAGACAGAAAATAATGCCAAATTAAGTCCACAAGAAATGTATGAGACTATAGCCCCATCCCTAACCAACCAAACCATGCCAATTGGGTATAACCAATTTGCTTCTTTCTCATCTTCAATGACAACCCATCATTGTCATCTAAATGAAAACCAAAATAATTCTTTGATGAATCTTCTTCAATTTTCTAAGGAAACAAACAACAATTGTAGTAGTGTTACTCAAATTAGTCCTAAATGTGATGATGGATATGGATTTTTGTGGGACATGGATTTGGAAGATCATCATGATGGTGTGGCCTCATCAGACATGGAAGGAATGAGATTCGAGGTTGATAATAATAGCATGGTCTTGTTATAA 828 0.3973 MGLRDVGASLPPGFRFYPSDEELVLHYLYKKITNEDVLKGTLEEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPITHEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKTENNAKLSPQEMYETIAPSLTNQTMPIGYNQFASFSSSMTTHHCHLNENQNNSLMNLLQFSKETNNNCSSVTQISPKCDDGYGFLWDMDLEDHHDGVASSDMEGMRFEVDNNSMVLL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02775 275 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Mepo4g02775 275 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Mepo4g02775 275 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Mepo4g02775 275 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Mepo4g02775 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02775 Mepo-Chr4 36447685 36452243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02775 9 165 NAC Transcription Factor Family AT1G76420 57.500 2.38e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g02775 NAM 1.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02775 - - gmx:100783645 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03136 3 41462128 41466848 Mepo4g02775 4 36447685 36452243 PCT