Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02764 ATGAAAGTAGGATTTGAAGTCCTTCATGCAAATCCAAACATGATTCATCCTCACATGCATGAAACATGGGACTATACAATCATTACAAATGACTTATTATTGCCACCTCCAATCCAAACAAATCCTTATCCAAAACCACTAACAGAAAATCACTCCCTAAACTTGGGAGGACAGAATAATGAGGTAAATGATTGGGTTGAACACATTACTAAACACTTTGTTGAAGATCACTTACCACAAAACACTTCTAATGATAATAGTTACAATAATCTTCAACAAATTCAAACAAACACCTCAGATTTAATTCAAAACCATAATAGTAATAGTGGTTATGAATGTGATCAAGGGTTGAATTTGATAACCCTTCTAATGGAATGTGCAGTGGCAATTTCAGTTGAAAATCATGGTGATGCTCATAGAATGTTACTAGAGTTAACACAATTAGCTTCACCTTACAAAACTTCATGTGCTGAACGTGTTGTTGCTTATTTTGCAAAAGCTATGATTAGTAGAGTGATGAATACATGGCTTGGAGCATGTTCTCCTTTGATTGATCATAGAACCATTCATTCTTCTCTACAAGTGTTCAACAATATTTCCCCTTTCATCAAATTTTCACATTTTACTTCAAACCAAGCAATTCTCGAAGCGGTGAACCGTTGTAATAGCATTCATATCATTGATTTGGACATCATGCAAGGGCTTCAATGGCCTGCTTTTTTTCACATACTCGCCACTCGAATGGAGGGTCGACCTTCAGTCCGAATGACGGGAATGGGAGCATCGATGGAACTTCTTGTTGAGACGGGGAAAAATCTTTCGAATTTCGCAAGAAGGCTTGGTTTGTGTTTGGAGTTTTACCCTATAGCATGTAAATTTGGTGAAGTTGTTGATGTTTCCATGTTGCAAATTAGGCCTAATGAAACACTTGCAGTTCATTGGTTGCAACATTCTTTGTATGATTCAACAGGACCTGATTGGAAAACTTTGAGACTTCTTGAAGAATTGGAGCCAAAAATCATAACTTTGGTAGAACAAGATGTTAACATTGGAGGGTCATTTTTGGACCGTTTTGTTGGTTCATTGCATTACTATTCCACCCTTTTTGATTCTCTTGGATCATATTTGCATAGTGATGATTCTAACAGGAACATTGTTGAACATGGTCTTCTATCTAAAGAGATCAACAATATATTAGCAATTGGTGGACCTAAGAGAAGTGGTGAAGAAAAGTTTAGGCTTTGGAGAAGTGAACTTGTAGCAAGAAATAGTTTTGAGCAGGTTCCAATGAGTGCTAATTCAATGGCTCAAGCACAATTGATATTGAACATGTATTCACCAGCTCATGGTTATAGTCTTGCTCAAGTTGATGGCATGTTAAGGCTTGGTTGGAAAGATACTAGTTTGTATACAGCTTCTTCTTGGACTTGTAGAACTTCTAGGTAG 1446 0.3679 MKVGFEVLHANPNMIHPHMHETWDYTIITNDLLLPPPIQTNPYPKPLTENHSLNLGGQNNEVNDWVEHITKHFVEDHLPQNTSNDNSYNNLQQIQTNTSDLIQNHNSNSGYECDQGLNLITLLMECAVAISVENHGDAHRMLLELTQLASPYKTSCAERVVAYFAKAMISRVMNTWLGACSPLIDHRTIHSSLQVFNNISPFIKFSHFTSNQAILEAVNRCNSIHIIDLDIMQGLQWPAFFHILATRMEGRPSVRMTGMGASMELLVETGKNLSNFARRLGLCLEFYPIACKFGEVVDVSMLQIRPNETLAVHWLQHSLYDSTGPDWKTLRLLEELEPKIITLVEQDVNIGGSFLDRFVGSLHYYSTLFDSLGSYLHSDDSNRNIVEHGLLSKEINNILAIGGPKRSGEEKFRLWRSELVARNSFEQVPMSANSMAQAQLILNMYSPAHGYSLAQVDGMLRLGWKDTSLYTASSWTCRTSR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02764 481 Pfam GRAS domain family 119 476 IPR005202 -
Mepo4g02764 481 ProSiteProfiles GRAS family profile. 110 476 IPR005202 -
Mepo4g02764 481 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 97 472 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02764 Mepo-Chr4 36337855 36339324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02764 94 479 GRAS Transcription Factor Family AT3G54220 51.392 3.60e-130 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo4g02764 GRAS 1e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02764 - - mtr:25484238 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02764 4 36337855 36339324 Mepo4g02764 4 36337855 36339324 ECH