Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02755 ATGGGAGGAACATATGAAACACAACCTTCATCTGAATCTCTTGTCACCAGGGACTTCTTCTCAGGAATTGATAATTCTTTCCTACCTGGAAAACTTGATCAGAAGTTGGACACTGGTAATATAGAAGAAGCAGAATTATCTTTGCGAGAAAGTGGCGTGTTAAATTATGAGGAAGCTAGAGCATTGCTAGGAAGATATGAGTATCAAAAAGGAAATTTAGTAGCTGCATTACATGTCTTTGAGGGAATAGATATAGGTGTTGTGACTCCTAAGATCAAAATCGCCCTTTCCAAAAACAAAGAACGCCGCAAGAAACATTCCCATAATCATGGTGAACCAGAAATGTCTATACATTCTGTTGGCTTACTGTTTGAAGCACTCTTTCTAAAAGCAAAATCGTTGCAGGCTCTTGAAAGGTTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTATGGACATAGTGGAATCTTCATTGCCTGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTGCAGGAGACCGTGAGCAAGGCAGTTGAGCTGCTTCCAGAATTGTGGAAGCTTGCTGATTGTCCTCGTGATGCTACTTTGTCTTACCGGAGAGCACTCCTTCATAAATGGAATCTTGATCCAGGGACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTATATAGTGGAGGAGAAGTAATGCCCCCTAATCTACGTTCTCAAATGGATGGCTCGTTTGTTCCGGGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATTTTGCTCAGAAAAGTCACTCTCAATAGAATTGAATGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTGTTTCGGGAGACCTATCGAGTTTAGCCAATCATTTGGAAGAATTACTCCCTGGGACTCTCCATCGAAGTGAAAGATTCCATGATCTAGCTCTTTGTAATTACGGAGCAGGTAAGGACTTGGTGGCACTGGATCTTTTAAGAAAATTGTTGACTGGTAGAGAAAGGCCGGAACACGTTCCCGGTTTGTTAATGGCTTCTAAGATTTGCTGCGAGAACCCTAGTCTTGCAGAAGAAGGGGTAAGTTTTTCTCAGAGAGCGCTTGAGAGCTTGGATGGAAGATGTAAGCAGTTAGAAAATGTTGCAAAATTCTATCTTGGTGTCTCATCATCGGCACACTCAAAATTGGCCGTTTCTGATTTCGAGAAGTTTAAGAGACAATCTGAGGCACTTCAAGCGTTGGAAACTGCCGGCAGAACGACCGGAATGAGAGACCCTTTAGTACTATTCCATCTCAGTTTAGAATATGCTGAACAAAGGAAGTTAAATGATGCACTTTATTATGCAAAGTGCGTCGTAAAACTGGAAGGTGGTTCTAACGTTAAAGGATGGTTACTGTTGGCGCGGATATTATCTGCTCAAAAACAGTTTTTGGAGGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAAATTCAAATTGCACTTGGACAGTTAAAGAATGCCATTGAGACGTACACTCAGCTTCTTGCTGTTCTTCAAATTCAAAGCAAAAGTTTTGGTTCTTGGAAGAAGCTATATAAGGGTAACCGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCATGATCTTGCTCATGTGTACATCAGTCTTTCCCAGTGGCATGATGCAGAGGCGTGTCTTTCAAAATCTAAGGCCATCAAACCGTATTCTGCTTCTAGATGTCATGCACTAGGTATAATGTATGAAGCAAAGGGCCTTTACAAAGAGGCTCTAAAAGCTTTTCGCGATGCTTTAGACATTGATCCTGGCCATGTCCGCAGCCTAATCTCCACTGCTGAAGTACTTAGACGCTGGAGTAATAAATCAAATCCTGCTGTCAGAAGTTTTTTGACGGATGCACTACGGCATGACAGATTGAATGCTTCTGCTTGGTATAATCTTGGTCTTTTTCACAAGGCTGAGGGTAAAATATCATCATTGGTCGAAGCTACAGAATGTTTCCAGGCAGCACACTCTCTTGAAGAATCTACTCCACTTGAACCTTTCAGATGA 2115 0.4132 MGGTYETQPSSESLVTRDFFSGIDNSFLPGKLDQKLDTGNIEEAELSLRESGVLNYEEARALLGRYEYQKGNLVAALHVFEGIDIGVVTPKIKIALSKNKERRKKHSHNHGEPEMSIHSVGLLFEALFLKAKSLQALERFKEAAQSCKVIMDIVESSLPEGLPDNFGAECKLQETVSKAVELLPELWKLADCPRDATLSYRRALLHKWNLDPGTIAKIQKEFVVFLLYSGGEVMPPNLRSQMDGSFVPGNNIEEAILLLMILLRKVTLNRIEWDPSILDHLSFALSVSGDLSSLANHLEELLPGTLHRSERFHDLALCNYGAGKDLVALDLLRKLLTGRERPEHVPGLLMASKICCENPSLAEEGVSFSQRALESLDGRCKQLENVAKFYLGVSSSAHSKLAVSDFEKFKRQSEALQALETAGRTTGMRDPLVLFHLSLEYAEQRKLNDALYYAKCVVKLEGGSNVKGWLLLARILSAQKQFLEAESIINAALDQTGKWDQGDLLRTKAKIQIALGQLKNAIETYTQLLAVLQIQSKSFGSWKKLYKGNRDRARNLEVEIWHDLAHVYISLSQWHDAEACLSKSKAIKPYSASRCHALGIMYEAKGLYKEALKAFRDALDIDPGHVRSLISTAEVLRRWSNKSNPAVRSFLTDALRHDRLNASAWYNLGLFHKAEGKISSLVEATECFQAAHSLEESTPLEPFR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02755 704 Pfam Tetratricopeptide repeat 595 625 IPR013105 -
Mepo4g02755 704 SMART tpr_5 592 625 IPR019734 GO:0005515
Mepo4g02755 704 SMART tpr_5 662 698 IPR019734 GO:0005515
Mepo4g02755 704 SMART tpr_5 466 499 IPR019734 GO:0005515
Mepo4g02755 704 SMART tpr_5 431 464 IPR019734 GO:0005515
Mepo4g02755 704 SMART tpr_5 502 535 IPR019734 GO:0005515
Mepo4g02755 704 SMART tpr_5 124 157 IPR019734 GO:0005515
Mepo4g02755 704 SMART tpr_5 558 591 IPR019734 GO:0005515
Mepo4g02755 704 Coils Coil 515 535 - -
Mepo4g02755 704 Gene3D Tetratricopeptide repeat domain 555 700 IPR011990 GO:0005515
Mepo4g02755 704 SUPERFAMILY TPR-like 433 531 IPR011990 GO:0005515
Mepo4g02755 704 SUPERFAMILY TPR-like 503 677 IPR011990 GO:0005515
Mepo4g02755 704 PANTHER PROTEIN NPG1 6 704 IPR043376 -
Mepo4g02755 704 ProSiteProfiles TPR repeat profile. 592 625 IPR019734 GO:0005515
Mepo4g02755 704 Gene3D Tetratricopeptide repeat domain 250 554 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02755 Mepo-Chr4 36247653 36251562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02755 6 704 Calmodulin-binding Proteins AT4G28600 58.873 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02755 4 36247653 36251562 Mepo3g03149 3 41592162 41597797 PCT