Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02746 ATGGGTCGTAAAAAAATAGGTATTGAATTTGTAGAGAACATAGATGCAAGGTATGTCACATTTTCTAAGAGAAAGAATGGTCTTTTTAAGAAAGCAAATGAGTTATCAGTTCTTTGTAATGCCAGAGTTGGTATAGTTGGTTTTACCCCTGCTGGTAACCCATTTGCTTTTGGTTCTCCAACTTTTCGAGTTGTGGCCGATGAGTACCTTCGTGAAACACAAGGTGAATCATCGAGGCAAAATGTTGAGCCTTCAAGAAATGGAAATATCAACGTGCCTGGCAAAGAACTTATGGGTGTGACGAAAGAGTTGAAGAAGGCGGAGATAATTGACAAAGGTAAACTACTTATTGCCTATGATGATCTTGATGTAGATGGACTTGAAAAAGTGAAGGCTTTGTTGGAAGAGATTCGTGCAGATATTGATGCAACATCGACTTTGCTTCTCCTTGCAAAAAAACCTATGTGA 468 0.3868 MGRKKIGIEFVENIDARYVTFSKRKNGLFKKANELSVLCNARVGIVGFTPAGNPFAFGSPTFRVVADEYLRETQGESSRQNVEPSRNGNINVPGKELMGVTKELKKAEIIDKGKLLIAYDDLDVDGLEKVKALLEEIRADIDATSTLLLLAKKPM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02746 155 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mepo4g02746 155 PANTHER MADS BOX PROTEIN 3 141 - -
Mepo4g02746 155 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 57 IPR002100 GO:0003677|GO:0046983
Mepo4g02746 155 Gene3D - 15 89 IPR036879 GO:0003677|GO:0046983
Mepo4g02746 155 SUPERFAMILY SRF-like 1 73 IPR036879 GO:0003677|GO:0046983
Mepo4g02746 155 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mepo4g02746 155 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mepo4g02746 155 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mepo4g02746 155 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02746 Mepo-Chr4 36193888 36194411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02746 1 72 Type I MADS-box Gene Family AT2G34440 55.556 2.03e-26 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo4g02746 SRF-TF 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02746 - - mtr:25493407 190.274