Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02744 ATGGCGCCAAGGCCCAATCCAAAAATAGCAGCGGCCCTCCAGGCAATGGCAGAGTTTGGGATTCCTGAAGCAAAAGTGAAACGGGTGCTAAAGAAACTGCTAAAGTTGTTTGATAAAAACTGGCAACTTATCGAGGAAGAGAACTATAGAGCTTTATTGGATGCTATATTTGAAGAAGGCGATGATTTTGAGGAGCCAGAACCACAAAAGAAAAACAAGAGAGTAAATGAAGAAGAGATGGAGGCTGAGGAAGCTCCATTAAATGTTGAATCTGCTCGACCTTTGAAAAGATTGAGATTAAGAGGACAAGAGAACAATTCCCCTGGCTCAGCTTCTTCCCCATTGAAGAAGTCTCACATAGAAAAGGCCACAGCACTTGAAGGCGGCTCTTCACAGCAGCCTCGAAACAACGCAGTGTCGTCTGATGGAAATGGAAGGGTTGCAGCACGTCCCATGCGAGATGCTAGTTCTGACAGGGGAAAGCAACCTGCGTCACCACATGCTTCTTATAAATTGACCGTACCTAAATCTGAGCCCGTTGATGAGGAAGATTATGAGCGGCGTCCCCTTGCAATGGTTCCCCCTGAACCATCAAGCTTAAGGTGCTATTCAAGGAAGAATGGTGTTACTGAAAAGCAAGGTGCCCATGTCTCCATGACACCATCACACCACAACACACTTAAAGAAGTGGTTTCTGATGTTGTGATAGCTTCTTCAGCTCAGGGAGAAGTAAAACTTTCTCTGAGCTGCAGCTCAGCTCTTCAGGGACCAGATTTCCGCATGCCTACTCAAGAACAACTTCTAAAGATGATGGAAGATAAATGTCTGCGATCATATAAAATCATCGACCCAAATTTTTCTGTCGCAAAAATGTTGAGAGATATATGTGATTGCATGTTGGAATTTAGCACTGATTCAAACGATAACTCACAAGAAGGTTCAATGTCAAAATCAAGCATAGATGTGTCAAAGGAATCAGAGGTTGATGGCACTCCCGCCGTTGGGGGCAGTAAGGATTTGGACACGGGTTCTCACTCATCAAATGGATCAATCCAAGTTAATTCTTTTTCTGCCTTGGTTTCACCTCGAGGCCCCTTTTCACCAGCCCATCAAAGCAGTTTGGATGATGCTGTACTGGTTTCCGAAATGAACAGGACAAATGATATTCCACAAAGTGATGTTAGAATGCAGCCGGAGGATCCCGTATCTCCAAATTCACTCAGTTTAGTAGTTGTTCCACATCACCAGTCTACAGAAGATCGTATAAGGTCTTATCATGATGTTAGTGACCTTACAAAAGGAGAAGAGAATAATCAAATTTCATGGGTGAATGAATCATCTACTAACGACTTTCCACCACCTTTCAACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTATGTTAACATTTCTCTATCTCGTATTGGGGCTGAGGACAGTTGTTCCTGTATAGGAAGTTGCGTCTTGTTGTCAGACACACATTGTGCCTGTACATATAAAACTGGGGGCGAATTTGCATATACAGCTCATGGCCTAATTAAGGAAGAATTTTTGGAAGAGTGTATTGCTATCAGTCACAACCCTCAACAGCATTGCTTTTACTGCAAAGATTGTCCACTTGAAAGGTCAAAGAGTGATGGTTGTTTGGAAACATGTAAAGGACACTTGAAGAGAAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAATGTGGAAATCGCGTTATCCAGCGTGGAATAACATACAACTTGCAGGTATTTTTCACACCTGAAGGAAAAGGATGGGGACTTCGTACCTTAGAGGAACTGCCAAAAGGAGCATTTGTGTGTGAGTTTGCTGGAGAAATTTTAACCGTTAAAGAGTTGCATGAGAGGAACATGAAATGTGCTGAAAATGGGAAATCTACTTACCCAGTTCTACTGGATGCGGATTGGGATTCAACGTTTGTGAAGGATGAAGAAGCTCTGTGCTTAGATGCAGCGTCCTTTGGCAACATTGCTAGATTTATCAATCACAGATGTTCTGATGCAAACTTGGTTGAAATCCCAATTCAAATTGAGTGTCCAGATCGTTATTACTATCATTTCGCCCTTTTTACCACCAGAAACATAGCAGCGCATGAAGAGCTCACTTGGGATTATGGCATTGACTTTGACGACCATGATCAACCTGTCAAACTGTTCCAGTGCAAATGTGGCAGTAAGTTCTGCAGGAATATGAAGCGATCAAACAGATCCACTAGGTCTGCGTTAATTGCTGGATGA 2277 0.4278 MAPRPNPKIAAALQAMAEFGIPEAKVKRVLKKLLKLFDKNWQLIEEENYRALLDAIFEEGDDFEEPEPQKKNKRVNEEEMEAEEAPLNVESARPLKRLRLRGQENNSPGSASSPLKKSHIEKATALEGGSSQQPRNNAVSSDGNGRVAARPMRDASSDRGKQPASPHASYKLTVPKSEPVDEEDYERRPLAMVPPEPSSLRCYSRKNGVTEKQGAHVSMTPSHHNTLKEVVSDVVIASSAQGEVKLSLSCSSALQGPDFRMPTQEQLLKMMEDKCLRSYKIIDPNFSVAKMLRDICDCMLEFSTDSNDNSQEGSMSKSSIDVSKESEVDGTPAVGGSKDLDTGSHSSNGSIQVNSFSALVSPRGPFSPAHQSSLDDAVLVSEMNRTNDIPQSDVRMQPEDPVSPNSLSLVVVPHHQSTEDRIRSYHDVSDLTKGEENNQISWVNESSTNDFPPPFNYIPQNLVFRDAYVNISLSRIGAEDSCSCIGSCVLLSDTHCACTYKTGGEFAYTAHGLIKEEFLEECIAISHNPQQHCFYCKDCPLERSKSDGCLETCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITYNLQVFFTPEGKGWGLRTLEELPKGAFVCEFAGEILTVKELHERNMKCAENGKSTYPVLLDADWDSTFVKDEEALCLDAASFGNIARFINHRCSDANLVEIPIQIECPDRYYYHFALFTTRNIAAHEELTWDYGIDFDDHDQPVKLFQCKCGSKFCRNMKRSNRSTRSALIAG 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02744 758 MobiDBLite consensus disorder prediction 59 202 - -
Mepo4g02744 758 ProSiteProfiles SET domain profile. 586 719 IPR001214 GO:0005515
Mepo4g02744 758 MobiDBLite consensus disorder prediction 125 143 - -
Mepo4g02744 758 CDD SET_SETDB-like 453 719 - -
Mepo4g02744 758 Pfam Ubiquitin-binding WIYLD domain 8 61 IPR018848 -
Mepo4g02744 758 SMART preset_2 428 570 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g02744 758 MobiDBLite consensus disorder prediction 306 321 - -
Mepo4g02744 758 Pfam Pre-SET motif 432 578 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g02744 758 MobiDBLite consensus disorder prediction 306 348 - -
Mepo4g02744 758 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 758 IPR025776 -
Mepo4g02744 758 SUPERFAMILY SET domain 439 742 IPR046341 -
Mepo4g02744 758 SMART set_7 586 725 IPR001214 GO:0005515
Mepo4g02744 758 MobiDBLite consensus disorder prediction 176 190 - -
Mepo4g02744 758 ProSiteProfiles Pre-SET domain profile. 480 583 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g02744 758 MobiDBLite consensus disorder prediction 64 81 - -
Mepo4g02744 758 Gene3D SET domain 431 744 IPR046341 -
Mepo4g02744 758 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 753 - -
Mepo4g02744 758 Gene3D - 1 62 IPR043017 -
Mepo4g02744 758 Pfam SET domain 598 719 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02744 Mepo-Chr4 36182290 36187840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02744 562 744 C2H2 Transcription Factor Family AT2G23740 38.947 1.70e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo4g02744 Pre-SET 6.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02744 - - gmx:100778335 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02744 4 36182290 36187840 Mepo4g02744 4 36182290 36187840 ECH
Mepo4g02744 4 36182290 36187840 Mepo3g03170 3 41818380 41825132 PCT