Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02742 ATGGCGAGGGAAGAAGACAACAACAACAACAACAACAACAACACAGTTGCAGTAACAGGGGAGAAATCCATTCATGATGATCAAGAAACCATAGCTACTCCCCGTGAAGCTTCTGTTGATGCTGCCGCTCCTCCGGCAAAGAAACGTGGCAGAAAGAGAAAAACGGAGAAGGAAGCCGAAAAGGGCGAAAGTGTGAGAAGGAGTGAGCGTGCTAGGAAGAGTAGTAGATCGCTGAATGAGGATTACTTGACAGATGTGAAGGAGGAGCTGGAACTGAAGAAGATCAAGGGGAAACGTGGTAGGAAGAAGAAGGTGGCAATTGGTGCTGGTGTCTCTGATGAAGTCAATGCTGCCCAGGAGGGGGAGATACCTGAATGCATTGAACAGCAACAAATGGCGATTGAAGATGGGTCCTTATTGGTCTGTAATAAGGACACTAATTGCCATCAATGTAAAAGAAATGACAAGGGCAGGGTTGTGAAATGCACACAATGCAAACGGAAGAAATTTTGCATACCCTGTATTAAGAATTGGTATCCTGACTTGAAAGAGGAGGACATTGCCAAGGCATGTCCAGGGTGCCGTGGTAATTGCAATTGCAAAGCATGCTTGCAATCAGATGCACTTATCAAGGCAATTAAAGAGAAGCCAGAAACCAACAATGACCATGAGGTTGAGCTCTCCAAGTATATGCTGAAAATACTTCTTCCGTGTTTAAGACGATTGGATGAAGAACAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAAGTGACAACTGCAAAACGTCAATATTCGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACATTTGTCTCCTTTGTTGCTGTGAGCTTCGTGGGAGATATTAATGTGCACCAATTCTTTACTGGGTACACAAATGGTCGTCTGGACTGGCTTAATTGGCCTCAGGTTTTGAAACTGAAAGATTGGCCGCCTTCTAATTTATTTGAAGAAAGTTTGCCCCGTCATTGTGCCGAGTTCATATCTTCCTTGCCGTTTAAAGAATATACAGATCCTTTCAAAGGTGTTCTAAACCTTGCTGTGAAGTTGCCTAAAGCTTTTTTACAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAGTTGGATTCTAAGGGCATTAATGCCATTAAAAAACTGACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACAATGTGATAATCGGGATGGAGTGCCCAACATTGGCATGCTTGATAATTCATCTTCTTCCATAAATGCTTCATATGAGCAAGATAGTGTTCGATTTGTGGAAAATGGAAGTGGATTATATGATGAAAAGGTGGTTGATCCAGAGCTCAAAGAAGTTGATAAAGAAAATAGTTTATTCGTTGGGGGCAATTCTTTAGACGGTGCTCTCTGGGATATTTTTCGAAGAGAGGATGTACCTAAATTGGAAGAATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCTATTGCTCTCCTTTAAAGCAGGTTGTTCACCCGATCCATGATCAGACATTTTATTTGACTATCGAGCATAAAAAGAGGCTTAAGGAGGAGTATGGAATTGAACCCTGGACTTTCGTTCAGAAGCTGGGAGATGCTGTTTTCATTCCGGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAACTTCCAGTAAATCACAAGTCTGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCTATGCTTGATCTGGTCGAGAAGTTGGAGGAAGCAAGGTCTGGAGAAACCAAGGTTCCTATGTAA 1971 0.4257 MAREEDNNNNNNNNTVAVTGEKSIHDDQETIATPREASVDAAAPPAKKRGRKRKTEKEAEKGESVRRSERARKSSRSLNEDYLTDVKEELELKKIKGKRGRKKKVAIGAGVSDEVNAAQEGEIPECIEQQQMAIEDGSLLVCNKDTNCHQCKRNDKGRVVKCTQCKRKKFCIPCIKNWYPDLKEEDIAKACPGCRGNCNCKACLQSDALIKAIKEKPETNNDHEVELSKYMLKILLPCLRRLDEEQMAEKEIEAKRQVTTAKRQYSTTTEAVQNALLTFVSFVAVSFVGDINVHQFFTGYTNGRLDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFKGVLNLAVKLPKAFLQPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSKGINAIKKLTQKHLEQDKRELQCDNRDGVPNIGMLDNSSSSINASYEQDSVRFVENGSGLYDEKVVDPELKEVDKENSLFVGGNSLDGALWDIFRREDVPKLEEYLKKHFREFRHVYCSPLKQVVHPIHDQTFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVNHKSAEDKLEVKKMIIYAMLDLVEKLEEARSGETKVPM 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02742 656 ProSiteProfiles JmjC domain profile. 348 614 IPR003347 -
Mepo4g02742 656 ProSiteProfiles Zinc finger RING-type profile. 148 195 IPR001841 -
Mepo4g02742 656 SMART cupin_9 329 614 IPR003347 -
Mepo4g02742 656 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g02742 656 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 144 209 IPR018866 -
Mepo4g02742 656 FunFam Transcription factor jumonji (JmjC) domain-containing protein 421 623 - -
Mepo4g02742 656 Pfam JmjC domain, hydroxylase 500 597 IPR003347 -
Mepo4g02742 656 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 289 649 IPR045109 GO:0032454|GO:0033169
Mepo4g02742 656 MobiDBLite consensus disorder prediction 1 77 - -
Mepo4g02742 656 MobiDBLite consensus disorder prediction 53 77 - -
Mepo4g02742 656 SUPERFAMILY Clavaminate synthase-like 305 635 - -
Mepo4g02742 656 Gene3D Cupin 256 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02742 Mepo-Chr4 36163775 36171776 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo4g02742 JmjC 4.3e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02742 K15601 - gmx:100780803 570.466