Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02737 ATGTCTACTATGTCTAAAGATGAAAACTTGACACTTTCTTCTGAGGATTCTTCTAGCCCAGATGAGTCTGAGCTTGAATTGGGTCTTGGGTTGAGCCTTTCTCACCCTGCAAAATCACATAACTACCATCATCATGGTTCTTATGCTAGAATTTTCACTGCTAAGGATTTTTCTCCTTCTTCACCTTCCTCTGCTGGAACCAAAAGACCTGCTGATTCTCTTGATGCTACCAACCGTCCCAGTCAAGTAGTTGGATGGCCGCCCCTTCGATCATATCGAGTGAATAGCTTTAATGCCAACGCTAAATCAACTGAAGCATTCAACTCTGTGGCCGAGAAGAGCAAGAATAATAATACTGTGGTAAGGAAGAGTACTGACAACGGAAATGATGATAACAACATTAATATCAAAGAAAAAAGACACCTCAGGAAATCCCCGTTTGTCAAAGTAAATATGGATGGGATACCTATTGGAAGAAAGGTTGATTTGAGTGCTCACAGTTCCTATGAAACATTGGCACAGACGTTGGAGGACATGTTTGACGAATCAACTACAAGCGTCACTTGCAAAGGATCAAATGGGGAGGATCGCAACATGACTACCAGAGGAGAAAGGCATTCAATACTGTTGGATGGATCGTCCAAGTTTGTACTCACTTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTTCCGTGGGGGATGTTCCTTTGTTCTGTGAGGAGGCTAAGAATCATGAGGACATCCGAGGCTAATGGACTTGCACCAAGATTGGAAGAAAAGAACAGCAGACAGAAAAGCAAGCCCATATAA 819 0.4261 MSTMSKDENLTLSSEDSSSPDESELELGLGLSLSHPAKSHNYHHHGSYARIFTAKDFSPSSPSSAGTKRPADSLDATNRPSQVVGWPPLRSYRVNSFNANAKSTEAFNSVAEKSKNNNTVVRKSTDNGNDDNNINIKEKRHLRKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTCKGSNGEDRNMTTRGERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLCSVRRLRIMRTSEANGLAPRLEEKNSRQKSKPI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02737 272 SUPERFAMILY CAD & PB1 domains 143 248 - -
Mepo4g02737 272 Gene3D - 140 262 - -
Mepo4g02737 272 ProSiteProfiles PB1 domain profile. 145 252 IPR000270 GO:0005515
Mepo4g02737 272 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 255 IPR003311 GO:0005634|GO:0006355
Mepo4g02737 272 MobiDBLite consensus disorder prediction 1 18 - -
Mepo4g02737 272 MobiDBLite consensus disorder prediction 112 133 - -
Mepo4g02737 272 MobiDBLite consensus disorder prediction 57 80 - -
Mepo4g02737 272 MobiDBLite consensus disorder prediction 1 39 - -
Mepo4g02737 272 FunFam Auxin-responsive protein 140 260 - -
Mepo4g02737 272 Pfam AUX/IAA family 62 259 IPR033389 -
Mepo4g02737 272 MobiDBLite consensus disorder prediction 57 85 - -
Mepo4g02737 272 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02737 Mepo-Chr4 36125744 36130090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02737 138 259 B3 DNA Binding Superfamily AT1G59750 32.787 3.33e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo4g02737 AUX_IAA 2.1e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02737 K14484 - gmx:100779400 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02737 4 36125744 36130090 Mepo4g02737 4 36125744 36130090 ECH