Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02664 ATGATGAAGAGACAAAGAGAAAACGAGGAAAAAGAGAGCATAGATTTAGCAACAAGTCTATTGCTACTCTCTTCTCGTACACAACAAAACAAAACATATTCTCCAGTTAAGTTTGAGTGCAAAACTTGCAACCGTAAATTCTCATCTTTTCAAGCCCAAGGTGGTCACAGAGCAAGTCACAAGAAGCTGAAAATTGATTCTGAAGAAGCACACAAAGTGAATATTCATAATAATAACTCCAAAATGCATCAATGTTCAATTTGTGGACAAGAATTCAAACTTGGTCAAGCTTTAGGTGGACACATGAGAAGACATAGAATTAATAATGAAGGGTTTTCATCTTCTTCTATAAATTATCAAGTGATAGCAAAATCTTCTCCTGTTTTCAAAAGATCGAATAGCAAGAGGGTTATGATCATGGAATTGGATTTGAATTTGACACCTTTGGAAAATGACTTGAAGTTGTTGTTTGGAAATAAGGCACCTAAAGTTGATATTTCGTTGTTCTGA 510 0.3451 MMKRQRENEEKESIDLATSLLLLSSRTQQNKTYSPVKFECKTCNRKFSSFQAQGGHRASHKKLKIDSEEAHKVNIHNNNSKMHQCSICGQEFKLGQALGGHMRRHRINNEGFSSSSINYQVIAKSSPVFKRSNSKRVMIMELDLNLTPLENDLKLLFGNKAPKVDISLF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02664 169 SUPERFAMILY beta-beta-alpha zinc fingers 79 107 IPR036236 -
Mepo4g02664 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Mepo4g02664 169 PANTHER ZINC FINGER PROTEIN ZAT5 10 152 - -
Mepo4g02664 169 SMART c2h2final6 83 105 IPR013087 -
Mepo4g02664 169 SMART c2h2final6 38 60 IPR013087 -
Mepo4g02664 169 Gene3D Classic Zinc Finger 35 105 - -
Mepo4g02664 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mepo4g02664 169 Pfam C2H2-type zinc finger 83 106 - -
Mepo4g02664 169 Pfam C2H2-type zinc finger 38 62 - -
Mepo4g02664 169 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Mepo4g02664 169 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02664 Mepo-Chr4 35308949 35309458 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02664 2 166 C2H2 Transcription Factor Family AT2G37430 45.304 2.03e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g02664 zf-C2H2_6 2e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02664 - - cam:101495964 236.113