Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02662 ATGATGAAGAGACAAAGAGAAAATGAAGAAAAAGAAAGCATAGATTTAGCAACAACTCTAATGTTACTATCTTCTCGTACCCAACAAAACAAAACATATTCTCCAGTTGAGTTTGAGTGCAAAACATGCAACCGTAAATTCTCATCTTTTCAAGCCCTAGGTGGTCACAGGGCAAGTCACAAGAAGCTGAAACTTATTGATTCTGAAGAAGCACACAAAGTGAATATTCATGATAATAAGCCCAAAATGCATGAGTGTTCAATTTGTGGACAAGAATTCAAATTGGGTCAAGCTTTGGGTGGACACATGAGAAGACATAGGATTAATAATGAAGGGTTTTCATCTTCTTCAATAAATTATCAAGTGATAGCAAAATCATCTCCTGTTTTGAAAAGATCGAATAGCAAGAGGGTTATGATCATGGAATTGGATTTGAATTTGACACCTTTAGAAAATGACTTGAAGTTGTTGTTTGGAAACAACGCACCTAAAGTTGATAATTCTTTGTTCTGA 513 0.3489 MMKRQRENEEKESIDLATTLMLLSSRTQQNKTYSPVEFECKTCNRKFSSFQALGGHRASHKKLKLIDSEEAHKVNIHDNKPKMHECSICGQEFKLGQALGGHMRRHRINNEGFSSSSINYQVIAKSSPVLKRSNSKRVMIMELDLNLTPLENDLKLLFGNNAPKVDNSLF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02662 170 SMART c2h2final6 84 106 IPR013087 -
Mepo4g02662 170 SMART c2h2final6 38 60 IPR013087 -
Mepo4g02662 170 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Mepo4g02662 170 PANTHER ZINC FINGER PROTEIN ZAT5 10 153 - -
Mepo4g02662 170 Pfam C2H2-type zinc finger 38 62 - -
Mepo4g02662 170 Pfam C2H2-type zinc finger 84 107 - -
Mepo4g02662 170 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Mepo4g02662 170 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Mepo4g02662 170 SUPERFAMILY beta-beta-alpha zinc fingers 38 106 IPR036236 -
Mepo4g02662 170 Gene3D Classic Zinc Finger 35 106 - -
Mepo4g02662 170 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02662 Mepo-Chr4 35298070 35298790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02662 2 166 C2H2 Transcription Factor Family AT2G37430 48.333 1.48e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g02662 zf-C2H2_6 2e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02662 - - cam:101495964 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03251 3 42657023 42657923 Mepo4g02662 4 35298070 35298790 PCT