Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02651 ATGGGTAACGCACACGGACACCATCGCAAACACCGTTTTTCTGTCCCTAACAACACGGTTCCTCCACCACCTTATAAATACCAAAACTCTCAACATCATAATCCACCCAACCAAAACCAAGGTACTTCCAATTCCAACATCAACATGACCACTTTGCCTTACGTTAACGCTGACATCTCTCTCCGTTCCCTCGCCGCTCAAGCTGAAGGCTTTGGCCGCTGCGCTATCGGGGGACTTCATGGTTCTCTTTATCATGTTACATCACTCTTAGATGATGGACCAGGATCATTACGCGACGCGTGTCGCAAAAAAGAACCTTTGTGGATTGTTTTTGAGGTTTCGGGTACAATTCATCTTTCGTCTTACTTGAGTGTGTCATCATACAAGACCATTGATGGAAGGAGCCAAAAGATTAAGCTGACTGGAAAGGGGCTTAGGCTGAAAGAATGTGAACATGTAATCATTTGTAATTTAGAGATAGAAGGAGGCAGAGGACCTGATGTTGATGCTATTCAGATCAAACCTAACTCAAAACATATATGGATAGATCGTTGCACTTTGAGTGATTTTGAAGATGGGCTCATTGATATCACTCGAGGCAGCACTGATATTACTATTTCAAGGTGTCATTTTCATCAGCATGACAAAACAATACTCATTGGGTCAGATCCCAAACATGTTGATGATAGATGCATGAAGGTTACCATACACCACTGTTTTTTCGATGGTACTCGACAGAGGCATCCTCGTGTTAGGTTTGCAAAAGTACACCTGTACAATAATTACTCCAGAAATTGGGGCATATATGCTGTTTGTGCAAGTGTGGAATCCCAGATATTCTCACAACATAATATCTATGAAGCGGGCCAGAAGAAGGTTGCTTTTAAGTATCTTCACGAGAAGGCAGCAGACAAGGATGCTGAAGCAACTGGCCACATAATTTCTGAAGGAGACTTATTCATAAACGGTGCTCAATCGGGGTTGATGACAGAGAATGTTGGGTGTAACAAGTTTCATCCCAGTGAGCACTATCAGACATGGACAGTGGAACCTCCTACAGATGATCTAAAGCAAGTTCTTCATCACTGTACTGGATGGCAATCTGTTGCGAGGCCAACAGATCAAGCCGTTTGA 1134 0.4312 MGNAHGHHRKHRFSVPNNTVPPPPYKYQNSQHHNPPNQNQGTSNSNINMTTLPYVNADISLRSLAAQAEGFGRCAIGGLHGSLYHVTSLLDDGPGSLRDACRKKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRSQKIKLTGKGLRLKECEHVIICNLEIEGGRGPDVDAIQIKPNSKHIWIDRCTLSDFEDGLIDITRGSTDITISRCHFHQHDKTILIGSDPKHVDDRCMKVTIHHCFFDGTRQRHPRVRFAKVHLYNNYSRNWGIYAVCASVESQIFSQHNIYEAGQKKVAFKYLHEKAADKDAEATGHIISEGDLFINGAQSGLMTENVGCNKFHPSEHYQTWTVEPPTDDLKQVLHHCTGWQSVARPTDQAV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02651 377 SUPERFAMILY Pectin lyase-like 67 369 IPR011050 -
Mepo4g02651 377 PRINTS Pollen allergen Amb family signature 67 84 IPR018082 -
Mepo4g02651 377 PRINTS Pollen allergen Amb family signature 269 288 IPR018082 -
Mepo4g02651 377 PRINTS Pollen allergen Amb family signature 247 266 IPR018082 -
Mepo4g02651 377 SMART amb_all 94 292 IPR002022 -
Mepo4g02651 377 MobiDBLite consensus disorder prediction 1 49 - -
Mepo4g02651 377 Gene3D - 52 360 IPR012334 -
Mepo4g02651 377 PANTHER PECTATE LYASE 18-RELATED 43 340 IPR045032 GO:0030570
Mepo4g02651 377 Pfam Pectate lyase 123 285 IPR002022 -
Mepo4g02651 377 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02651 Mepo-Chr4 35175567 35179384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02651 89 377 Polysaccharide Lyase AT3G55140 73.702 5.16e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02651 K01728 - gmx:100814368 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02651 4 35175567 35179384 Mepo4g02651 4 35175567 35179384 ECH