Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02638 ATGGAAGAAACAACATCAACCATCATGGCAGCACTTTCATCTCTCCCTCCTCCCCACCTCACAAACCTCACAAACACCATTCTCTCCTCCACCCGCCGCCACCACCGCCGTCTCACCTTCCTCCTCTCCTCCCCATCACTCTTCTCTCTAACCCTTCACCACCTCCACACTCTCTCTCTTCAACAAAAAACTCTCCTCATTTCACGCCACCTCCTTTCCTATCTACACCTCCTCACCCTATCAAACAACCCCACCTCACCTCTTCCACCTCCTGTTTCAACTTCCATGAGAGAACGTGACACCGACGCTGTGCTACTCCTTCTCTTGTTCTGTGAAACACATAAACACAATCCAGAAGCACTAACCGCACCGTTTTCACACTGGAGGCTAAACTTGAACAAAATCTTCTCCAACACATTGTTAACGATTGGTTATTCTTCTGCACCACCGCTTGGTGCGTGTTTTGGATCGGTTTTGATTCCGTTTATAGAGACGGTGAGTCGGTGCTGGAGATTGGTCGGTGTTTTGGGTTGTGAAGAAGGAAAGGAAGTGAAGGAGGTGGCGGCTTCGGCGGCGACGGTGGTTTCTTTGCCGGCGGTGGAGGTGAGTGTTGGTGGGAGAGAGTGTGTGATATGTAAAGAAGAGATGCAAGTAGGGAGAGACGTGTGTGAGTTGCCATGTCAGCATTTGTTTCATTGGATGTGTATTTTACCATGGTTGGGAAAGAGGAACACGTGTCCTTGTTGTAGGTTTCGGTTACCGTCCGATGATGTTTTTGGAGAGATCCAACGGTTGTGGGAAGTCTTGGTTAAAATTAGTGCTAAACATAACAGGATGATTGATTAA 846 0.4835 MEETTSTIMAALSSLPPPHLTNLTNTILSSTRRHHRRLTFLLSSPSLFSLTLHHLHTLSLQQKTLLISRHLLSYLHLLTLSNNPTSPLPPPVSTSMRERDTDAVLLLLLFCETHKHNPEALTAPFSHWRLNLNKIFSNTLLTIGYSSAPPLGACFGSVLIPFIETVSRCWRLVGVLGCEEGKEVKEVAASAATVVSLPAVEVSVGGRECVICKEEMQVGRDVCELPCQHLFHWMCILPWLGKRNTCPCCRFRLPSDDVFGEIQRLWEVLVKISAKHNRMID 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02638 281 CDD RING-H2_PA-TM-RING 208 250 - -
Mepo4g02638 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 261 IPR013083 -
Mepo4g02638 281 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 136 254 - -
Mepo4g02638 281 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Mepo4g02638 281 Pfam Ring finger domain 208 250 IPR001841 -
Mepo4g02638 281 SMART ring_2 209 249 IPR001841 -
Mepo4g02638 281 SUPERFAMILY RING/U-box 203 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02638 Mepo-Chr4 35062185 35063652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02638 2 276 C3H Transcription Factor Family AT5G02750 50.174 9.77e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02638 - - cam:101509295 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02638 4 35062185 35063652 Mepo4g02638 4 35062185 35063652 ECH