Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02630 ATGACAAGGGGTATCCAGATGAGTGTCAATGGTGACTGTAAAGAACTTGGTCAGCATTTGCGGGATGGGAAGAACAACTTAAATGAAGGAGTAGCTGGTGAGGATGATGAAGTGAAATGTAATGGAGTGACTGATGGAGTTAAGGTTGGAGAGGGAGGGAATGGCAAATCCTCTTCTGTTCAGCAGCAAGTACCGCAGCAACAGTCTCAAGGGGCAATTATTTGTTGGGAGAGGTTTTTACATATTAGATCCCTTAAGGTCTTGCTTGTGGAGTATGATGACTGTACCCGCCATATTGTCACTGCATTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCTTGGAAGATTTTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGTATTGCACTTCTATACAAGATTATGGGCCACCCAACACGGAAAAACGTTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTCGACTTTCTAGTAAAACCCATACGCAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGTCATAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAAACCCAGAAATCTGTTAAATCAAGGAGTCTTGAGAAGTTTGATAACAATTCGGGAAGCAATGACGAGCAAGATAACGGAAGTTTAGGCCTGAACAATGGGGATGGTAGTGACAATGGTAGTGGCACTCAGAGCTCCTGGACCAAACGAGCTGTAGAAGTTGACAGTCCTAAATCAGGCTCTCAGTGGGATCAGATAGCCGAGTGTCCCGACAGCACTTGTGCTCAAGTTGTTCACTCCAATGCTGAAATATGCATGGAAAAGATGGTTCCTCCAGTCTTAAAGGAGTGTCTAGAGAAAAAGGAACAAATAGTCAAAATTGCAGGTTCAAAACATATCAACAGACTTGATGTGGGCCCTTCTAAATTCAACGAGCAAATTAATACAGGACAGATGGACCCTAATTGTGAGAATCAATCTGGCAAGCTAAGATGCAAAGTGCTTTCATTATCTGATGCAGTTACTAGCCCTTCTGACTCCCAAATGCAAAGTGGAGAAATTGAAGCCCTAAATAGAAGACCCAACTTCTCAGATATTGACAAAAAAGGTACTAATAATGATGAGGAGTTGCCATCTCTTGAGCTCAGTTTAAAGAGGCCTAGAGAAGTTGAAGAAGCTGGTACTGCAATTCAGGATGAACGGAATGTTTTAAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCCACCTTCAATGCTAAGAAGTCTCCCACCGGATGTGTCGGAAGCAACTCTCCGCCTAATAACAGCTTAGAAGTAACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGATGTTAGCAACAACATTGATATGGGTTCCACTACTACTAATGCTTTTACCAAATCTGCAGTTATAAGAGAGCCAGCAGCGGCATCAACAACCAAATTTTTGTACCAAACGTCTGCTTTCCAGCCCATAAAAAACAACCTTATGTGTACCTCTCAACAAGTTGTCTCACATAATAATGAAGATACGACAACAACAATCCTGGCACCACCTAAAATTGACAAGAGTTCTGCTACTCAGGATTTCCATCACCATTATGAAAACCACAGCAATGTTGCTAACATGCAGCACCAGTTGCCACCTGAGCATGATGCCGAATCTTCAAAGAAAATGACTGTTGTTGCTCCACACTGTGGGTCATCAAATGTGGTCAAAGTGCCAGTTGAAGGTAATACGGGAAATTACAGTATCAATAGAAGTGCTTCAGGAAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCGCTGCAATTAATGCTGGAGGGACAAACATAGACAGCAACAATGGACTCGCTGGGAATAGTGGCAGTGGTGATGCTAGTGGAAATGGAAGTGGCAACAGAGTAGATCAAAACAAGAATTCTCAAAGGGAAGCAGCCCTAATTAAATTTCGCCAAAAAAGAAAGGAGAGGAAAGAGAGGTGCTTTCATAAGCAGGTTCGATATCAGAGCAGGCAGAAATTAGCTGAACAACGACCACGGTATCGAGGGCAATTTGTGCGACAGTCCTCGAATGGTAATGCAAGTGAGGCAACAGATAGTTGA 2250 0.4253 MTRGIQMSVNGDCKELGQHLRDGKNNLNEGVAGEDDEVKCNGVTDGVKVGEGGNGKSSSVQQQVPQQQSQGAIICWERFLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSRSLEKFDNNSGSNDEQDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKSGSQWDQIAECPDSTCAQVVHSNAEICMEKMVPPVLKECLEKKEQIVKIAGSKHINRLDVGPSKFNEQINTGQMDPNCENQSGKLRCKVLSLSDAVTSPSDSQMQSGEIEALNRRPNFSDIDKKGTNNDEELPSLELSLKRPREVEEAGTAIQDERNVLRRSDQSAFSRYNATFNAKKSPTGCVGSNSPPNNSLEVTKKDSSRDIQSHSSGNPPNQNSNDVSNNIDMGSTTTNAFTKSAVIREPAAASTTKFLYQTSAFQPIKNNLMCTSQQVVSHNNEDTTTTILAPPKIDKSSATQDFHHHYENHSNVANMQHQLPPEHDAESSKKMTVVAPHCGSSNVVKVPVEGNTGNYSINRSASGSNNGSNGQNGSSAAINAGGTNIDSNNGLAGNSGSGDASGNGSGNRVDQNKNSQREAALIKFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSSNGNASEATDS 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02630 749 ProSiteProfiles Response regulatory domain profile. 86 204 IPR001789 GO:0000160
Mepo4g02630 749 MobiDBLite consensus disorder prediction 630 694 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 373 437 - -
Mepo4g02630 749 ProSiteProfiles CCT domain profile. 695 737 IPR010402 GO:0005515
Mepo4g02630 749 MobiDBLite consensus disorder prediction 630 749 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 239 271 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 455 473 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 732 749 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 392 437 - -
Mepo4g02630 749 PANTHER TWO-COMPONENT RESPONSE REGULATOR 85 373 IPR045279 GO:0009736
Mepo4g02630 749 SMART REC_2 85 200 IPR001789 GO:0000160
Mepo4g02630 749 MobiDBLite consensus disorder prediction 373 389 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 455 507 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 209 226 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 483 507 - -
Mepo4g02630 749 FunFam Two-component response regulator-like PRR37 85 243 - -
Mepo4g02630 749 SUPERFAMILY CheY-like 83 209 IPR011006 -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 209 283 - -
Mepo4g02630 749 Pfam Response regulator receiver domain 87 198 IPR001789 GO:0000160
Mepo4g02630 749 Pfam CCT motif 692 737 IPR010402 GO:0005515
Mepo4g02630 749 CDD psREC_PRR 87 190 - -
Mepo4g02630 749 Gene3D - 84 247 - -
Mepo4g02630 749 MobiDBLite consensus disorder prediction 711 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02630 Mepo-Chr4 34955020 34965862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02630 161 739 Response Regulator Gene Family AT5G02810 47.182 1.12e-111 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mepo4g02630 Response_reg 3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02630 K12129 - gmx:100796933 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02630 4 34955020 34965862 Mepo4g02630 4 34955020 34965862 ECH