Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02625 ATGTTCTCTGTGGCAGAAGAAAACCAAACCATGAACTCAAATTCCAACTCAATGGCAGCACCAACAACAACAACAGCTAGTGGTGGAGATGCTTCTGGTAAGAAGGTTAGAAAGCCATACACAATTACCAAGTCAAGAGAAAGCTGGTCTGATGAAGAACATGACAAGTTTCTTGAAGCTCTTCAATTGTTTGATAGAGATTGGAAGAAGATTGAAGATTTTGTAGGTTCTAAAACAGTTATTCAGATTCGAAGTCATGCCCAAAAATACTTCTTAAAGGTTCAAAAGAATGGAACACTAGCTCATGTCCCTCCTCCTCGTCCTAAGCGCAAAGCTATTCATCCTTACCCACAAAAAGCAACAAAAAATGTTTTGGTGCCACTGCCAGCATCCATTGCTTTTGGCTCTTCCACAAACACCCTTCTACCTGCAGGGTATGTCACATGGGACGAAACGTCCATGCTGATGAATACTTGTCCGGATGAACTCAACAATCTTCACGGAAATGAAGCTGACATTGGATCAAAGGGGATCAGCAACAGCGGTCTTAGTGGTGTTGAAGATACTAATACAAGGCTACCTACTTCTCAAATACCAACGCAAGGGACACAAAATCCCGTGATTCATGGTTTGCCGGACTTTGCTGAAGTTTACGGTTTCATTGGAAGCGTTTTTGATCCAGATACAAACGGTCATGTGCAGAAGCTGAAGGAAATGGACCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTAATTTTGATCCCATTAAGAATGCAATGTCAACATATGATGAGAATAACGATGCAGTAGGAGTTACTGATGATAAGAAGCAGACAAATGATGACTCATGTCAAACCACTTGA 894 0.4094 MFSVAEENQTMNSNSNSMAAPTTTTASGGDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAIHPYPQKATKNVLVPLPASIAFGSSTNTLLPAGYVTWDETSMLMNTCPDELNNLHGNEADIGSKGISNSGLSGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPNFDPIKNAMSTYDENNDAVGVTDDKKQTNDDSCQTT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02625 297 FunFam protein REVEILLE 6 isoform X1 48 96 - -
Mepo4g02625 297 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Mepo4g02625 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 95 IPR017930 -
Mepo4g02625 297 NCBIfam myb-like DNA-binding domain, SHAQKYF class 44 93 IPR006447 GO:0003677
Mepo4g02625 297 MobiDBLite consensus disorder prediction 1 39 - -
Mepo4g02625 297 CDD SANT 48 91 IPR001005 -
Mepo4g02625 297 SMART sant 45 93 IPR001005 -
Mepo4g02625 297 MobiDBLite consensus disorder prediction 177 206 - -
Mepo4g02625 297 Gene3D - 49 96 - -
Mepo4g02625 297 PANTHER SWI/SNF COMPLEX-RELATED 12 259 - -
Mepo4g02625 297 ProSiteProfiles SANT domain profile. 44 97 IPR017884 -
Mepo4g02625 297 Pfam Myb-like DNA-binding domain 46 91 IPR001005 -
Mepo4g02625 297 MobiDBLite consensus disorder prediction 277 297 - -
Mepo4g02625 297 MobiDBLite consensus disorder prediction 1 30 - -
Mepo4g02625 297 ProSiteProfiles Myb-like domain profile. 41 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02625 Mepo-Chr4 34895670 34901842 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g02625 Myb_DNA-binding 4.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02625 - - gmx:100797466 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02625 4 34895670 34901842 Mepo4g02625 4 34895670 34901842 ECH