Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02624 ATGGCAGCCGCCGCAGCACGTCCTCTCGTCACTGTCCACACCGTCGAAGGTGACATGGCCACTGACACCCCTACCACCCTCCCCATCCCTGATGTCATGCGTGCAGCCATCCGTCCCGACATCGTCAACTTCGTCCACTCCAACATCTCCAAAAACGCCCGTCAACCCTACGCCGTCAGCCGTAAAGCCGGTCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTTTCCCGTATCCCTCGTGTTGCCGGAGGTGGTACCCACCGTGCTGGACAAGCTGCTTTCGGTAACATGTGTCGTGGTGGTCGCATGTTTGCTCCTACCCGGATCTGGCGCAAATGGCACCGCAAAATCAATGTGAATCAGAAACGTTACGCTGTTGTTTCTGCTATAGCTGCTTCTGCTATTCCTTCACTTGTTCTCGCTCGTGGTCACCGGATCGAAACGGTTCCTGAGCTTCCTCTTGTTGTTGGTGATTCTGCTGAAGGTGTTGAGAAGACTAAGGAAGCGATCAAGCTTTTGAAATCAATTGGAGCTTACCCTGATGCCGAGAAGGCGAAGGATAGCCTTGGCATCCGTCCTGGAAAAGGTAAAATGCGTAACCGTCGGTATATCTCTCGTAAGGGACCGTTGATTGTTTATGGTACCGAAGGAGCGAAAGCAGTGAAGGCTTTTCGCAATATTCCTGGTGTTGAGATCACCAATGTTGAAAGGTTGAATCTTTTGAAGCTTGCACCTGGTGGTCATTTAGGGAGATTTGTGATTTGGACTAAAACTGCTTTTGAGAAATTGGATTCGATTTATGGTTCCTTTGACAAGCCTTCGGAGAAGAAGAAGGGTTATGTGCTTCCTAGGGCTAAGATGGTGAATTCTGATTTGACTAGGATTATTAACTCTGATGAGGTTCAGAGTGTTGTTAGGCCTGTGAAGAAGGATGTGAAGAAGGCTACTTTGAAGAAGAATCCTTTGAAGAATTTGAATGTTATGTTGAGGCTTAATCCTTATGCTAAGACTGCTAAGAGGATGGCTTTGCTTGCTGAAGCTGAGAGGGTTAAGTCTAAGAAGGAGAAGCTCGATAAGAAGAGGAAGACTGTCTCTAAGGAAGAAGCTTCTGCTATCAAGGCTGCAGGAAAAGCATGGTACAATACTATGGTGTCAGATTCTGATTACACCGAATTTGATAACTTCTCCAAATGGTTGGGTGTCTCACAATGA 1221 0.4799 MAAAAARPLVTVHTVEGDMATDTPTTLPIPDVMRAAIRPDIVNFVHSNISKNARQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPELPLVVGDSAEGVEKTKEAIKLLKSIGAYPDAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFDKPSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPVKKDVKKATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKLDKKRKTVSKEEASAIKAAGKAWYNTMVSDSDYTEFDNFSKWLGVSQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02624 406 FunFam 60S ribosomal protein L4 4 309 - -
Mepo4g02624 406 PANTHER 60S RIBOSOMAL PROTEIN L4 5 399 IPR045240 -
Mepo4g02624 406 Coils Coil 343 370 - -
Mepo4g02624 406 Pfam 60S ribosomal protein L4 C-terminal domain 281 353 IPR025755 -
Mepo4g02624 406 ProSitePatterns Ribosomal protein L1e signature. 121 147 IPR013000 -
Mepo4g02624 406 Gene3D - 4 309 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mepo4g02624 406 Pfam Ribosomal protein L4/L1 family 29 267 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mepo4g02624 406 SUPERFAMILY Ribosomal protein L4 10 268 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02624 Mepo-Chr4 34892340 34894595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02624 1 406 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 81.773 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02624 K02930 - gmx:100779764 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02624 4 34892340 34894595 Mepo4g02624 4 34892340 34894595 ECH