Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02609 ATGGGGAAGAATAAGCCAAATTGGTTTTCTAATGTCAAGAAAGCTCTTAGCCCTGACTCTAAACAAAACAAACATCAGAATTCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGAAAAAATTAAACACTTCAGATTCATATCCAGAAACTGATCAAGCACCTCCTTTTCATCCACCTGAGGCTGAAGAGGAGATTATTTTAACACATATTGAGAATCAAAACAATCATGTTGAAGTTGCAACAGACGTGGATGTTGATGTACCTGTTCCTGATGTTCAGACAGAGACTGTTGAGGTTCAAGCCGCTCCAATTGTTCAGGTTGCCAGTAAACCCAATGATGAGGTTGCGGCAATCATGATTCAAACCACTTTTCGGCGATACTTGGCAAGAAGAGCATTTCGGGCTTTAAGGGGGCTAAACAGGTTGAGAGCACTAATGGAAGGGCCAGTCGTAAAACGTCAGGCCATCAGTACCCTCCGCTCCATGCAGACTTTAGGTCATGTGCAATCCCAGATTCGTTCGAGGCGGGTCAGGATGTTAGAGGAGACTCAAGCTCTTCAAAAACAGCTTTTACAAAAGCACACAAAAGAGCTAGAGATACAGATTGGGGAGGAATGGGATGAAAGCATACAATCAAGAGAGCAAATTGAAGCCAAGTTACTAAGCAAGTACGAGGCTACTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCACTCATCAGAAAAATGGGCGGAATTCATCAAAATCTATAAATCCAATGTTCATGGATCCAACCAATCCTAGTTGGGGATGGAGCTGGTTGGAACGTTGGATGGCAGCCAACCAAAGCCTGATGGAAAAAGAGAACAATTCATCTGTAAAAAGTTCAATCCGCGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCCGAAAATCATTCTCCAACAGCAAGCCAAAATCCGGGTTCACCTAACTTCCAATCCAACTCAAAGCCTCCCAAGCCAGCAATTCTCAAGAAACTGAATAAGGCTAGTCCAAAGGTGAGCTGTATTATAGATGATGACACCAAAAGCATGACTAGTGTTCAGTCGGAGCGAGTCCGGAGAAGGCACTCCATTGCTGGATCAATAGTGAGAGATGATGAAAGTCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTAAGTCTGCAAAAGCCAAGTCCAGGTTGCAAAGTCCATCATCTGCAGAGAATAGTACACCAGAAAAAGGGTCCTTTGGAAATGCAAAGAAACGGCTTAATTTCCCGGCTTCGCCTGCCAGATCATCAAGGCGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTAAATGCAGAAATTACTGTTGGCAATGGTGTGGCTGTTTGA 1395 0.4351 MGKNKPNWFSNVKKALSPDSKQNKHQNSSGSKKKWFGKKKLNTSDSYPETDQAPPFHPPEAEEEIILTHIENQNNHVEVATDVDVDVPVPDVQTETVEVQAAPIVQVASKPNDEVAAIMIQTTFRRYLARRAFRALRGLNRLRALMEGPVVKRQAISTLRSMQTLGHVQSQIRSRRVRMLEETQALQKQLLQKHTKELEIQIGEEWDESIQSREQIEAKLLSKYEATMRRERAMAYSFTHQKNGRNSSKSINPMFMDPTNPSWGWSWLERWMAANQSLMEKENNSSVKSSIRGITSAEISKSFARFQLNSENHSPTASQNPGSPNFQSNSKPPKPAILKKLNKASPKVSCIIDDDTKSMTSVQSERVRRRHSIAGSIVRDDESLASSPSVPSYMVPTKSAKAKSRLQSPSSAENSTPEKGSFGNAKKRLNFPASPARSSRRHSGPPKVESSLNAEITVGNGVAV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02609 464 MobiDBLite consensus disorder prediction 1 58 - -
Mepo4g02609 464 Pfam Protein of unknown function (DUF4005) 380 445 IPR025064 -
Mepo4g02609 464 MobiDBLite consensus disorder prediction 311 337 - -
Mepo4g02609 464 PANTHER IQ-DOMAIN 5-RELATED 1 447 - -
Mepo4g02609 464 MobiDBLite consensus disorder prediction 311 332 - -
Mepo4g02609 464 MobiDBLite consensus disorder prediction 401 421 - -
Mepo4g02609 464 SMART iq_5 112 134 IPR000048 GO:0005515
Mepo4g02609 464 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Mepo4g02609 464 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Mepo4g02609 464 MobiDBLite consensus disorder prediction 355 464 - -
Mepo4g02609 464 MobiDBLite consensus disorder prediction 10 25 - -
Mepo4g02609 464 MobiDBLite consensus disorder prediction 359 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02609 Mepo-Chr4 34765142 34769177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02609 1 463 IQD Protein Family AT5G03040 50.826 7.95e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02609 - - tpra:123912717 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02609 4 34765142 34769177 Mepo4g02609 4 34765142 34769177 ECH
Mepo3g03302 3 43058561 43062493 Mepo4g02609 4 34765142 34769177 PCT