Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02603 ATGGGTAAGAAAAAGTCAGAGGATTCAGGACCATCTACAAAGGCTAAACAAGGTAGCAAAGATGTTTCTAAGAAGGAAAAAATTTCTGTCTCTGCCATGTTGGCTAGTATGGATGAAAAAGCTGATAAGCCAAAAAAAATATCTTCTTTCAATAAGCCGAAGCCAAAACCTGCTCTGAAAGCTTCTGCATACACTGATGATATTGATCTTCCTCCCTCTGATGATGATGAATCTGAAGAGGAGCAAGAGCAAAAACATAGGGCTGATGTTAAGCCACTTGAGGTGTCTATTGCTGAAAAAGAGTTGAAAAAGCGTGAAAAGAAAGATATTTTAGCTGCCCATTTGGCTGAACAGGCAAAGAAAGAAGCTCTTAGAGATGATCATGATGCTTTCACTGTTGTCATCGGAAGTCGGGCTTCGGTTCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACGATAGACAATTTTTCTGTGTCTGCTCGTGGTAAAGAACTTATGAAGAATGCATCAGTGAAGATATCTCATGGAAAACGGTATGGTTTGGTTGGGCCGAATGGAATGGGCAAGTCAACACTTTTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCTAAGAATATTGACGTCCTTCTGGTTGAGCAGGAGGTAGTTGCTTCTAGTGAAGAAGGTGCAGATAAAGATGATACTAATGCGGAAGAGGATGCAGGAGAAAAGTTAGCTGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCATCAAAGATTTTAGCTGGTTTGGGTTTTACAAAGGATATGCAAGGCCGTCCTACAAAATCCTTTAGTGGGGGTTGGAGGATGAGAATTTCTTTAGCTCGATCACTTTTTGTGCCGCCCACTCTATTATTGCTCGATGAACCCACTAATCATCTTGACCTGAGGGCTGTTCTCTGGTTAGAAGAATACTTGTGTCGCTGGAAGAAGACTTTGGTGGTTGTATCACACGATAGAGATTTTCTCAATACAGTATGCTCTGAGATTATTGACTTGCATGATTTCAAACTTCATTTCTATCGTGGAAATTTTGATGCTTCTGAAAGCGGGATTAAACAACATCGTAGGGAGGTGAGTAAGAAGTATGAGATTTATGTCAATCAATTGAAAGCAGCTAAAAGGACTGGAAACAAGGCTCAACAAGATAAGGTGAAGGATGGAGCTAAGTTTGCAGCTGCTAAAGAAGCATCGAAAAGCAAAAGTAATGGAAAGGTTGATGAGGATGAGGCCCAAGTAGAGGTACCACACAAATGGAGAGACTACAGCGTGAAGTTTCACTTTCCTGAACCTACTGAACTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTTAGCTACCCAAACCAGGAGGATTTAAGACTCTCAGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATCGTTGGGCCTAACGGTGCTGGAAAAACTCTTCTAAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATAGGGAGATATTCCCAACACTTTGCGGACCTACTAACAATGGATGAAACACCTGTTCGGTACCTTCTTCGTCTGCATCCAGACCAGAAGGGACTTAGTAAGCAAGAGGCTGTCCATGCAAAACTTGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCATTGGTTGATGCGCTGAATAAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATTTCACGTGTATGTGAGGATGAAGAACAGAGTCAAATATGGGTTGTTGAAGATGGCACTGTAAGAAATTTCCCTGGAACATTTGAGGATTACAAGGAAGATCTGCTGAAAGAAATTAAAGCTGAAGTTGACGACTGA 1935 0.415 MGKKKSEDSGPSTKAKQGSKDVSKKEKISVSAMLASMDEKADKPKKISSFNKPKPKPALKASAYTDDIDLPPSDDDESEEEQEQKHRADVKPLEVSIAEKELKKREKKDILAAHLAEQAKKEALRDDHDAFTVVIGSRASVLDGDDGADANVKDITIDNFSVSARGKELMKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVASSEEGADKDDTNAEEDAGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARSLFVPPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIDLHDFKLHFYRGNFDASESGIKQHRREVSKKYEIYVNQLKAAKRTGNKAQQDKVKDGAKFAAAKEASKSKSNGKVDEDEAQVEVPHKWRDYSVKFHFPEPTELTPPLLQLIEVSFSYPNQEDLRLSDVDVGIDMGTRVAIVGPNGAGKTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFADLLTMDETPVRYLLRLHPDQKGLSKQEAVHAKLDEPTNHLDMQSIDALVDALNKFTGGVVLVSHDSRLISRVCEDEEQSQIWVVEDGTVRNFPGTFEDYKEDLLKEIKAEVDD 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02603 644 Gene3D - 137 390 IPR027417 -
Mepo4g02603 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 366 IPR027417 -
Mepo4g02603 644 Gene3D - 563 643 IPR027417 -
Mepo4g02603 644 ProSitePatterns ABC transporters family signature. 283 297 IPR017871 GO:0005524|GO:0016887
Mepo4g02603 644 MobiDBLite consensus disorder prediction 1 91 - -
Mepo4g02603 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 155 386 IPR003439 GO:0005524
Mepo4g02603 644 Gene3D - 442 545 IPR027417 -
Mepo4g02603 644 CDD ABCF_EF-3 458 619 - -
Mepo4g02603 644 FunFam ATP-binding cassette sub-family F member 2 446 549 - -
Mepo4g02603 644 SMART AAA_5 179 365 IPR003593 GO:0016887
Mepo4g02603 644 SMART AAA_5 484 619 IPR003593 GO:0016887
Mepo4g02603 644 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 564 638 - -
Mepo4g02603 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 628 IPR027417 -
Mepo4g02603 644 CDD ABCF_EF-3 155 356 - -
Mepo4g02603 644 FunFam Putative ABC transporter ATP-binding component 156 421 - -
Mepo4g02603 644 Pfam ABC transporter 475 535 IPR003439 GO:0005524
Mepo4g02603 644 Pfam ABC transporter 171 311 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02603 Mepo-Chr4 34672122 34674265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02603 168 351 Calmodulin-binding Proteins AT2G36910 25.743 2.15e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02603 K06184 - gmx:100806226 975.696