Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02593 ATGAAATTCTCACTTTTCGCTTGTTTCTCTTCATGGGCTACTGAAAATAACAACATCAACAACGATTATGCTGAGGGAGATATTAATGATGGAAGCTTTCGTGTATTTACTTATAACCAATTGAAATCTGCTACTAATAATTTTGATCACAAAATTGGTCAAGGTGGATTTGGCTCTGTTTATAAGGGGAGGCTCATAGATGGATCGTTTGTGGCAGTGAAAGTGCTTTCTGTTGAGACTGAATCTATGAGAGGAGAGAGGGAATTTGTTGCAGAATTGGCTGCACTAGCAAATATAAAGCACCAAAATCTTGTTGGTTTTAAAGGATGTTGTGTTGAAGGAGCAAAAAGATATTTAGTCTATGATTACATGGAGAATAATAGCCTCCACCACACTTTCTTAGGTTGTGAGGAGAGAAGGACGAGCTTCAGTTGGGAATCAAGGAGGAATATATCTATTGGTGTGGCTCGTGCAATTTCCTATCTCCATGAGGAGTTGAAGCCTCATATAGTACATAGAGATATCAAGGCCAAAAATATTCTCATAGACAGAAATTTTACACCAAAAGTTGCAGATTTTGGTTTGGCCAAATTAATGAGAGATGAAACATCTTACATTAGCACTAAAGTTGCAGGAACATTGGGTTATTTGGCTCCAGAGTATGCTAGTTCTGGACAACTAAGAAGGAAATCAGATGTTTATAGTTTTGGAGTATTGCTTTTGCAAATTATCACTGGCTTGGCTGTGGTAGATGCCTATACAGACATTGAACGTTTCATTGTAGAAAAGGCTTGGGCAGCTTATGAGGCTAATGATCTATTAAGAATAGTTGATCCAGTGCTTAATACAAACTATTCAGTTGAAGAAGCCATAAAATTCCTCAAAGTGGGGTTACTTTGCGTGCAAGAAACAGCAAGACTTAGGCCAAAAATGTCGGAGGTTGTAGAAATGTTGACCAACAACAATGTTGATATGAAAGAGGTTAAGATTTCAAAACCAGGATTTGTTGCTGATCTCAGAAACATTAGAATAAAACAACACAAGATAACAGACTCCCCACAGTCTGGTTCTTCTGGAGGAGCATCCTTTGCAAGCTCCGTCTGGAGTATGGGAAATCTCGCTCGTTGA 1128 0.3839 MKFSLFACFSSWATENNNINNDYAEGDINDGSFRVFTYNQLKSATNNFDHKIGQGGFGSVYKGRLIDGSFVAVKVLSVETESMRGEREFVAELAALANIKHQNLVGFKGCCVEGAKRYLVYDYMENNSLHHTFLGCEERRTSFSWESRRNISIGVARAISYLHEELKPHIVHRDIKAKNILIDRNFTPKVADFGLAKLMRDETSYISTKVAGTLGYLAPEYASSGQLRRKSDVYSFGVLLLQIITGLAVVDAYTDIERFIVEKAWAAYEANDLLRIVDPVLNTNYSVEEAIKFLKVGLLCVQETARLRPKMSEVVEMLTNNNVDMKEVKISKPGFVADLRNIRIKQHKITDSPQSGSSGGASFASSVWSMGNLAR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02593 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mepo4g02593 375 ProSiteProfiles Protein kinase domain profile. 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02593 375 SUPERFAMILY Protein kinase-like (PK-like) 30 320 IPR011009 -
Mepo4g02593 375 FunFam serine/threonine-protein kinase PBS1-like 14 123 - -
Mepo4g02593 375 CDD STKc_IRAK 52 320 - -
Mepo4g02593 375 Pfam Protein kinase domain 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02593 375 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 124 330 - -
Mepo4g02593 375 SMART serkin_6 46 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02593 375 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Mepo4g02593 375 Gene3D Transferase(Phosphotransferase) domain 1 124 337 - -
Mepo4g02593 375 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 354 - -
Mepo4g02593 375 Gene3D Phosphorylase Kinase; domain 1 18 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02593 Mepo-Chr4 34512788 34516389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02593 27 333 Receptor kinase-like Gene Family AT1G53430 47.910 6.10e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g02593 Pkinase 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02593 - - gmx:100813945 558.525