Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02579 ATGGCTTCTGTTATATCAAGAGCCGTAAGGTTTCATGATGATCTTGAAAAGGAGAAATTACAAGAAGGTGAAGAAAGTCACATGGAAATGAGTGCATATGAGATGAGTAGTGAATACAAGCATGGAAAAGATGCAATAAACAAGCCATCATCAAATGGAAGAGGACTTTCAAGAGTTTTTTCTGAAGATTATGATGCAGGAGAGATTTTAGTATATGATCCTAGAGGACCTAGAATAAATTTATGGAACAAAATATTCTTAGTAGCTTGTTTGATTTCATTATTTGTGGATCCACTTTTCTTTTACTTACCAGTTGCTAAGAAAGAAAAGTGTATTGATATGTCAATTGGTCTTGAAGTTTCACTTACTATAATTAGAACATTTGTTGATGCATTTTACATTATTCATATCTATATTAGGTTTCAAACTGCTTATATTGCTCCTTCATCTCGTGTTTCTGGTCGAGGAGAACTCATTATAGATCCCTCAAAGATTGCATCAAACTACATGAAAAAAGAACTTTGGTCTGATCTTGTTGCAGCACTACCACTTCCTCAGGTACTCATTTGGGCTGTAATTCCAAATATAAAGGGGTCAGAAATGATTGCATCAAGGCATGTAGTGCGCCTGGTGTCCATTTTCCAGTACTTATTGAGGCTGTATCTTATTTATCCTCTATCATCTAAGATAACCAAGGCAAGTGGAGTAATGATGGAAAAAGCTTGGGCTGGTGCAGCTTATTATTTGACACTCTATATGCTTGCTAGTCATGTTTTAGGATCTACTTGGTACCTGTTATCAATTGAAAGACAAGATGAATGTTGGAAGAAAGCTTGTACACTTCAATATCCACATTGCCAGTATCATTATCTTGATTGTCAAAGCTTAAGTGATCCAAATAGGAATGCTTGGCTTAAATCAAGCAATCTATCAGGTCTATGTGATCAGAACAGTCACTTCTTTCAGTTTGGAATTTTTGATGATGCTATGACTTTGGAAATAACTAGCTCAAACTTCTTAACCAAGTACTATTATTGTCTTTGGTGGGGATTGAGGAATCTAAGTTCTTCAGGAGAGAATCTCTTAACAAGTACACATGTTGCGGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTTTTTGCACTGCTCATAGGAAATATGCAAACGTACCTTCAATCGACCACTATACGGCTGGAAGAGTGGCGAATAAGGAGGACAGATACAGAAAGATGGATGCATCACAGGCAGCTCCCTCGTTACCTGAAGGAAAATGTTCGACGCCATGACCAATTTAGATGGGTAGCTACGCGTGGAGTCGACGAGGAAGCAATTCTTAGAGACCTTCCTGTTGATCTAAGACGCGACATTAAACGCCACCTTTGCCTTAATCTAGTTAGACAAGTGCCACTATTTGATCAGATGGATGACAGGATGTTAGATGCAATATGTGAAAGGCTAAAACCAACTCTATGCACTCCAGGAACTTGCATAGTTCGCGAAGGCGACCCTGTCGACGAAATGCTCTTCATCGTTCGAGGACGTTTAGATTCTTGCACGACCAACGGTGGTAGAACTGGTTTTTTCAACACCTGCAGAATAGGCTCAGGCGACTTCTGCGGTGAAGAGCTTTTACCATGGGCCTTAGACCCTCGTCCAACCGCTGTGCTTCCTTCATCAACTCGCACAGTGAGAGCCATCACCGAAGTCGAAGCTTTTGCACTCATTGCCGAGGATTTAAAGTTTGTAGCAGCACAATTCCGCCGGTTACATAGCAAACAACTGAGACAAACCTTTAGATTCTATTCACATCAGTGGAGGACATGGGCTGCATGTTTTATACAAGCAGCTTGGTTTCGGTATAAGAGAATGAAAGAGACAAATGAGGTTAAGGAAAAGGAGAATCTTATGATGATGTCAAATGTGAAATATTATGGAAATGATGATTCTCAGTATTTCTCTGCACCTCTGCAAGTGCCAAAGGGATCAAGTTATTCAATGTATTCTGGAAAACTAGTAGGTAGTTTAAGGAGAGGAAGAAGCATGAGATATGGTTCTGAACTTGATATGCTTGGGACATTAAGGAAGCCTATTGAACCAGATTTTAATGATGATGATGATTAA 2133 0.3929 MASVISRAVRFHDDLEKEKLQEGEESHMEMSAYEMSSEYKHGKDAINKPSSNGRGLSRVFSEDYDAGEILVYDPRGPRINLWNKIFLVACLISLFVDPLFFYLPVAKKEKCIDMSIGLEVSLTIIRTFVDAFYIIHIYIRFQTAYIAPSSRVSGRGELIIDPSKIASNYMKKELWSDLVAALPLPQVLIWAVIPNIKGSEMIASRHVVRLVSIFQYLLRLYLIYPLSSKITKASGVMMEKAWAGAAYYLTLYMLASHVLGSTWYLLSIERQDECWKKACTLQYPHCQYHYLDCQSLSDPNRNAWLKSSNLSGLCDQNSHFFQFGIFDDAMTLEITSSNFLTKYYYCLWWGLRNLSSSGENLLTSTHVAEINFAVIVAILGLVLFALLIGNMQTYLQSTTIRLEEWRIRRTDTERWMHHRQLPRYLKENVRRHDQFRWVATRGVDEEAILRDLPVDLRRDIKRHLCLNLVRQVPLFDQMDDRMLDAICERLKPTLCTPGTCIVREGDPVDEMLFIVRGRLDSCTTNGGRTGFFNTCRIGSGDFCGEELLPWALDPRPTAVLPSSTRTVRAITEVEAFALIAEDLKFVAAQFRRLHSKQLRQTFRFYSHQWRTWAACFIQAAWFRYKRMKETNEVKEKENLMMMSNVKYYGNDDSQYFSAPLQVPKGSSYSMYSGKLVGSLRRGRSMRYGSELDMLGTLRKPIEPDFNDDDD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02579 710 SMART cnmp_10 474 605 IPR000595 -
Mepo4g02579 710 Gene3D Helix hairpin bin 402 465 - -
Mepo4g02579 710 FunFam Cyclic nucleotide-gated ion channel 1 472 590 - -
Mepo4g02579 710 SUPERFAMILY Voltage-gated potassium channels 73 396 - -
Mepo4g02579 710 Pfam Cyclic nucleotide-binding domain 497 584 IPR000595 -
Mepo4g02579 710 CDD CAP_ED 474 605 IPR000595 -
Mepo4g02579 710 Gene3D Jelly Rolls 472 592 IPR014710 -
Mepo4g02579 710 ProSiteProfiles cAMP/cGMP binding motif profile. 474 559 IPR000595 -
Mepo4g02579 710 PRINTS EAG/ELK/ERG potassium channel family signature 254 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g02579 710 PRINTS EAG/ELK/ERG potassium channel family signature 343 360 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g02579 710 PRINTS EAG/ELK/ERG potassium channel family signature 437 444 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g02579 710 PRINTS EAG/ELK/ERG potassium channel family signature 137 146 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g02579 710 PRINTS EAG/ELK/ERG potassium channel family signature 369 380 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g02579 710 PRINTS EAG/ELK/ERG potassium channel family signature 387 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo4g02579 710 Gene3D - 85 398 - -
Mepo4g02579 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 54 648 - -
Mepo4g02579 710 SUPERFAMILY cAMP-binding domain-like 404 596 IPR018490 -
Mepo4g02579 710 Pfam Ion transport protein 81 400 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02579 Mepo-Chr4 34290634 34294372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02579 52 708 Ion Channels AT2G28260 62.253 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02579 K05391 - gmx:100815543 1153.27