Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02576 ATGGAGGGAATTACCAATGGCCATGCTGAAGCAACCTTTTGTTTGAGCAAAAATGGTGGTGATCCACTCAACTGGGGCGCGGCGGCGGAGTCATTGACAGGGAGTCATTTGGATGAGGTGAAGCGTATGGTGGAGGAGTATCGTAACCCGTTGGTTAAAATCGGCGGTGAGACACTTACCATTGCTCAGGTGGCTGGAATTGCCTCCCATGATAGTGGTGTTAGGGTGGAGCTTTCGGAGTCGGCGAGGGCCGGTGTTAAGGCAAGTAGTGACTGGGTGATGGATAGTATGAATAAAGGTACGGACAGTTATGGTGTTACCACCGGTTTTGGTGCTACTTCTCACCGGAGAACTAAACAAGGTGGTGCCTTGCAGAAGGAGCTAATTAGGTTTTTGAATGCTGGAATATTTGGCAATGGTACAGAATCAAATTGTACACTACCACATACAGCAACAAGAGCTGCAATGCTTGTGAGAATCAATACTCTTCTTCAAGGGTATTCTGGTATTAGATTTGAAATCTTGGAAGCTATCACAAAGCTCCTAAACAATAACATTACCCCGTGTTTACCACTTCGCGGTACAATCACAGCTTCCGGTGATCTTGTTCCACTTTCTTACATTGCTGGTTTATTAACCGGCAGACCCAACTCTAAAGCCGTTGGACCGTCTGGAGAAATTCTCAATGCCAAGGAAGCTTTTCAACTTGCTGGCATTGGTTCTGATTTCTTTGAATTGCAACCTAAGGAAGGTCTTGCTCTTGTTAACGGAACTGCTGTTGGTTCTGGTTTAGCTTCTATTGTTCTGTTCGAAGCCAATGTACTAGCGGTTTTGTCTGAAGTTATGTCGGCAATTTTCGCTGAAGTTATGCAAGGGAAACCTGAATTTACTGATCATTTGACTCATAAGTTGAAGCATCACCCTGGTCAAATCGAAGCTGCTGCTATTATGGAACATATTTTGGATGGAAGCGCTTATGTTAAAGCCGCTAAGAAGTTACATGAGACCGATCCTTTGCAAAAGCCTAAACAAGATCGTTATGCACTTAGAACTTCACCTCAATGGCTTGGTCCTTTGATTGAAGTGATAAGATTTTCAACCAAGTCTATTGAAAGAGAGATTAACTCGGTCAATGACAACCCTTTGATCGATGTTTCAAGAAACAAGGCCATACATGGTGGTAACTTTCAAGGAACACCTATCGGAGTTTCAATGGATAACACTCGTTTAGCTCTTGCTTCGATCGGTAAACTCATGTTTGCTCAATTCTCTGAGCTTGTTAATGATTTTTACAACAATGGCTTGCCTTCGAATCTCACTGCTAGTAGAAACCCAAGTTTGGATTATGGTTTTAAGGGATCTGAAATTGCCATGGCTTCTTATTGCTCTGAGTTACAATATCTTGCTAACCCTGTCACCACCCATGTACAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGAAAAACAAACGAGGCTATTGAGATCTTAAAGCTCATGTCTTCCACTTTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAAGAGAATTTGAGGAACACTGTCAAGAACACTGTAAGCCAAGTTGCTAAGAGAACACTCACAACCGGTGTCAATGGAGAACTTCATCCTTCTAGATTTTGCGAGAAAGATTTACTCAAAGTTGTCGACAGGGAGTATGTGTTTGCCTATGCTGATGATCCTTGCCTGGCTACATACCCTTTGATGCAAAAGTTGAGACAAGTTCTTGTGGAACATGCATTAGTGAATACCGAAGGAGAGAAGAATTCGAACACATCAATCTTCCAAAAGATTGCTACATTTGAGGATGAATTGAAGGCTATTTTGCCAAAGGAAGTTGAAAGTGCAAGGGCTGCATATGAAAATGGACAAAGTGGAATTTCAAACAAGATTAAGGAATGTAGGTCTTATCCATTGTACAAGTTTGTTAGAGAGGAGTTGGGAACAGCGTTGCTAACCGGTGAAAAGGTGATATCACCGGGTGAAGAGTGCGACAAATTGTTCACAGCTATGTGCCAAGGTAAAATTGTTGATCCTCTTATGGAATGTCTCGGAGAATGGAACGGCGCTCCTCTTCCAATTTGTTAA 2139 0.4245 MEGITNGHAEATFCLSKNGGDPLNWGAAAESLTGSHLDEVKRMVEEYRNPLVKIGGETLTIAQVAGIASHDSGVRVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFQLAGIGSDFFELQPKEGLALVNGTAVGSGLASIVLFEANVLAVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHETDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYADDPCLATYPLMQKLRQVLVEHALVNTEGEKNSNTSIFQKIATFEDELKAILPKEVESARAAYENGQSGISNKIKECRSYPLYKFVREELGTALLTGEKVISPGEECDKLFTAMCQGKIVDPLMECLGEWNGAPLPIC 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02576 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Mepo4g02576 712 FunFam Phenylalanine ammonia-lyase 13 258 - -
Mepo4g02576 712 NCBIfam phenylalanine ammonia-lyase 21 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mepo4g02576 712 FunFam Phenylalanine ammonia-lyase 259 565 - -
Mepo4g02576 712 Gene3D Fumarase/aspartase (Central domain) 259 707 - -
Mepo4g02576 712 FunFam Phenylalanine ammonia-lyase 525 646 - -
Mepo4g02576 712 CDD PAL-HAL 57 522 IPR001106 -
Mepo4g02576 712 Gene3D - 525 646 IPR023144 -
Mepo4g02576 712 Gene3D - 13 258 IPR024083 -
Mepo4g02576 712 Pfam Aromatic amino acid lyase 59 533 IPR001106 -
Mepo4g02576 712 SUPERFAMILY L-aspartase-like 21 712 IPR008948 GO:0003824
Mepo4g02576 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02576 Mepo-Chr4 34243084 34247576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02576 18 712 Monolignol Biosynthesis Gene Families AT2G37040 84.029 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02576 K10775 - gmx:100803857 1283.86