Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02573 ATGGACCGGGAAGAATATTTGCGCAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGCTTGATGAATCATATGTGCCCTCCCTTCAAGATGATGAAATGGAATTTGAGCATTTGCTTGAAGAACCTAGAAATGATCATGTTTCATTGGATGGCACTTTAACTTCTCATACCGCTTTGAATGACAAAGATGATTTGGAACTAGAGGTCCTAGATGGATTCCTTGGAGATGGATTCCTGGATGATGTTGACATCAATGATCTTGAAGGAACTGATGTTTTCTCCAATGCATGTGGAGGGTATTTCTTGGATTTTGATTTGGCAAAGGTTGAGATACTAGAACATGGTGCTTATGAAGACTCGCCTTTGGAAAATTCAAATTCAGAAAGTCATTCTCCAGGATTTAGTGGAAGTAGCACTGTTGGTGGGATATCAGAATCAACAAAAGCACCCAATAGTACACAATCTAAATCCGAAATTAAATCTCTGGATGACACAGTCGCCCATGATACACATGGTGTCTTCAGGAACAATCCTACTCAACCATCAAATGTAGATTGCATGTACAACATTTCACTTGATATACAGCATCTGCATGAGTTGAATAATGGTTATCCTTTAGCTGGTAGTATATTGTCTTGTAAGAAGGAAAATGTTACTGTTGAACAATGTCAATCTGCTCCACCTAGAGAGAAGAGATTCCGAAAGCCTACTCAGAGGTATATTGAAGAATCTTCAAATTTGAAGTCAAAAGAAAAAGTATCATCTACTGGTGTAAAACGTAAACGGCGGACTGTGTCATTAAGCAATGAGTTCCATACAAAAACTAAAGAATTGAAAGATATTCCAAGCGACGAGTCTAGTAGTGGTAATAGTGATGTGACGCTTTCTGAGTTGCAATGCTGCAAGAAGCATCCAAAGAAAGAGAAGCTCGAGTATGACTATGAGCCTTTTTCATCGGAAGAGTCTGAGGATGAACATTTGACACCAAAAAGAGGCAGATCAAAAGATCGAAGAAAGAATCAAAGGATGTGGACAGTCTCTGAAGTGACAAAGTTGATTGACGGCATATCTCAATATGGAGTTGGTCGATGGACTGATATACAGAAGTTTTTGTTTTCTTCTGAAGGCTACCGAACTCCCACAGATGTCAGGGACAAGTGGCGTAACCTTTTAAGAGCCTGTACTGCACAGAAATTCAGCAAGAAAGAGGATGAGCAAAATGATGAGACTGCCCCGCGGATCTTACCATTTAGTGTGGCTAGCCGAGTGCTGGAATTGGCTCAAATTCACCCATACCCAAAGCGACGAAACAAAAAGAGATTCACCAGTGAACGCTATGGTCCATCTAGTAGTCTTGGCAAAAGAAATTTACGTAGGAAGAAGTGTACTTAG 1392 0.4009 MDREEYLRKCSNMKCQRVQLDESYVPSLQDDEMEFEHLLEEPRNDHVSLDGTLTSHTALNDKDDLELEVLDGFLGDGFLDDVDINDLEGTDVFSNACGGYFLDFDLAKVEILEHGAYEDSPLENSNSESHSPGFSGSSTVGGISESTKAPNSTQSKSEIKSLDDTVAHDTHGVFRNNPTQPSNVDCMYNISLDIQHLHELNNGYPLAGSILSCKKENVTVEQCQSAPPREKRFRKPTQRYIEESSNLKSKEKVSSTGVKRKRRTVSLSNEFHTKTKELKDIPSDESSSGNSDVTLSELQCCKKHPKKEKLEYDYEPFSSEESEDEHLTPKRGRSKDRRKNQRMWTVSEVTKLIDGISQYGVGRWTDIQKFLFSSEGYRTPTDVRDKWRNLLRACTAQKFSKKEDEQNDETAPRILPFSVASRVLELAQIHPYPKRRNKKRFTSERYGPSSSLGKRNLRRKKCT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02573 463 Gene3D - 330 443 - -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 224 271 - -
Mepo4g02573 463 Pfam Myb-like DNA-binding domain 344 406 - -
Mepo4g02573 463 ProSiteProfiles Myb-like domain profile. 336 391 IPR001005 -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 227 249 - -
Mepo4g02573 463 CDD SANT_TRF 342 392 - -
Mepo4g02573 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 336 395 IPR017930 -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 434 463 - -
Mepo4g02573 463 SUPERFAMILY Homeodomain-like 338 407 IPR009057 -
Mepo4g02573 463 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 443 - -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 119 159 - -
Mepo4g02573 463 SMART sant 340 393 IPR001005 -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 313 341 - -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 120 159 - -
Mepo4g02573 463 MobiDBLite consensus disorder prediction 313 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02573 Mepo-Chr4 34195576 34201905 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g02573 Myb_DNA-bind_6 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02573 - - gmx:100810255 506.908