Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02572 ATGAGGAACTGTGTTTCCTGCATTGTTCTCTTTATACTCTCGTTATCGCTGTTGCCAAAGATTCATTCCGCCCCTTCCTTTTTCACCGATGAAATCTACAAGGAACTTCAGAGTATCGCTGTTTTTTTGAATCAGGATATTAAATCCAGTTTAAGTTTCTGCATTAAGGATCCGAAAAAAGATTGGGAGGAAGCTTTTGATTTTACAGGAAAGTTGGATTTCGTTGATTCTTGTGTTAAGAAAAAAGGAGATTTCCGGGATCGAATATGTACTGCAGCTGAAATAAGGTACTACTTCCATGGTTTCGTGGCACAGGCAGGAGCATCATCTGAACATTATGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGATGGGCTTGTAGTGCAGGCAAGGATATTGACCTAAAAAAGGACATAAAGGAAATTCCAAAAAGAACCAAAAACTGTAAACCTTGTTGCGAGGGTTTTTTCTGTCCTCAAGGATTGACTTGTATGATACCTTGCCCCCTAGGTTCTTATTGTCCACTTGCAAAACTGAACAAACAGACTGGACTATGTGAACCATATAGTTACCAGATACCTTCGGGAGAAACAGATCATGATTGTGGTAGTGCTGATATTTGGACTGGTGTGCTGAACAATAGTGATATTTTCTGTTCTCCTGGATCATACTGCCCAACTACAACACGTAAAGTTTCTTGCGATCGTGGGTTGTATTGTTCATTTTTTGCAGCATGCTCCAAGTTCAGCCAATGTAATCCAAACACAACAACCCAAAATATGCATGCTTATGGTGCTCTGCTTATTGTTGCATTGAGTACTGTCCTGATCTTCATTTATAACTGTTCTGATCAAGTTCTAGCTACACGAGAAAGAAGGAAAGCTAAATCAAGAGAAGCTGCAGCAAGACAGGTGAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAGCTGGCAAAAGATGCTGCTAAAAAGCATAAGTTGGGATTAACACACCAGCTATCACGCACTTTTTCTCGCAAAAAATCAGTAAAGCAAGGGGAGCAAGCTAATCCTGCTATGAGCAATTCAGGTTTGCCACCTCCTCCAGCACTGGCATCTGCAGCTATAAAAGGCCAAACAAAGGAACCTAGCAACCTTACTAAAATGTTGGATTCCTTTGACGACCCTAATAGTAATGAAGGATTCAATCTAAAGATTGGGGACAAAAATATTAAAAAGCAAATGCTAAAGGGAAAAAATTTACATACGCAAAGTCAAATTTTAAGATATGCTTATGGTCAGATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAATAACTTGACCTTCTCAGGAGTGATTTCAATGGCCTCTGAAGTTGAGGAGGATATTAAATCGAGGCCTGAGATCGAGGTAGCTTTCAAAGATGTAACCCTTACTTTGAAAGGGAAAAGAAAACATATACTGAGGTGTGTGACAGGTAAAATCATGCCCGGTCGAGTTTCAGCTGTGATGGGTCCCTCGGGAGCTGGCAAAACTACATTTCTTTCTGCCTTGGCAGGGAAAATAAGAGGATGCACTATGACAGGCTCAATTTTAGTCAATGGAAGACCTGAATCCATTCACTGTTATCAGAAAATTGTTGGATATGTGCCGCAAGATGATATTGTGCATGGGAACTTGACTGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGATGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAAACCTTGGGACTCCAGGCAATAAGAGATTCCCTTGTTGGGACAGTAGAGAGGCGAGGCATATCTGGTGGGCAACGAAAACGTGTAAATGTAGGGTTGGAGATGGTTATGGAGCCTTCATTGTTAATCTTAGATGAGCCTACAACTGGTCTGGACAGTGCATCTTCCTCTTTACTGCTGAAAGCACTTCGTCGTGAAGCTGCTGAAGGGGTAAATGTTTGCATGGTACTTCATCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCAAAAGGTGGCCTTACTGCATATCACGGACCTGTAAAAAAAGTAGAAGAATACTTTGCCGGCATTGGTATCCCTGTTCCTGATCGCGTGAATCCTCCAGACCATTTTATTGACATTCTGGAAGGTTTAGTGAAACCAAATGAAGGTGTGACTTATCAACAACTACCTGTCAGATGGATGATTCATAATGGTTACCCAGTACCACCAGATATGCTTCATTATGCTAATGAAATTTCTGCTTCATCTTCCTCAAATGTAAATCATGCAATAAAGGGTGCTGATGATGCTGCTGATCAATCATTTGCCGATGAGTTTTGGGAGGATATGAAAAGTAATGTGCAGTTGCATAAAGATCATATAGAGGCAACCTTCTTATCGACTAAGGACTTATCTGGCCGAAGAACTCCCGGTGTAGGTCGGCAGTATAGATACTACCTTGGGCGGGTTGGTAAGCAGCAGTTGCGAGAAGCAAAAGCACAAGCAGTTGACTATCTCCTTTTATTAGTTGCTGGTGCTATCTTGGGAACTCTTACTAAAGTAAACGATGAAACATTTGGATCTCTTGGATATACATATACTGTCATTGCTGTATCTCTACTTTGCAAGATTGCAGCTCTGAGATCATTTTCTATGGATAAATTACAATACTGGAGGGAGAGTGCATCAGGGATCAGCAGTCTAGCTCATTTTTTGGCCAAAGATACAATTGATCTTTTCAGTACAATCGTCAAACCTCTCATTTATTTATCCATGTTCTACTTTTTTAGCAATCCAAGGTCAAGCTTCGAAAGTAATTATGTAGTTTTGGTATGCCTTGTGTACTGTGTGACTGGCATGGCATACGCATTAGCAATTTATTTTGAGCCTGCTCCTGCTCAGCTGTGGGCAGTGCTTCTCCCTGTTGTCATGACTCTCATTGCAAACCAGACAAGAGATACTACCTTTATGAAGATCCTAATTAAAATGTGTTACCCAAATTGGGCTTTGGAGGCCTTTATTATTGCAAATGCTGAAAGGTACACCGGCGTGTGGCTGATAACTCGTTGTAGTTCACTGATGAGTAAAGGTTATAATGTTAATGATTGGCCTATTTGTCTAGCTGTCCTCGTTTTTTATGGTATAGTTGCTCGTATTGTGGCCTTCATTTGTCTCATGATCACCCAAAAGAAGTGA 3234 0.406 MRNCVSCIVLFILSLSLLPKIHSAPSFFTDEIYKELQSIAVFLNQDIKSSLSFCIKDPKKDWEEAFDFTGKLDFVDSCVKKKGDFRDRICTAAEIRYYFHGFVAQAGASSEHYVKPNKNCNLTSWVSGCEPGWACSAGKDIDLKKDIKEIPKRTKNCKPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNKQTGLCEPYSYQIPSGETDHDCGSADIWTGVLNNSDIFCSPGSYCPTTTRKVSCDRGLYCSFFAACSKFSQCNPNTTTQNMHAYGALLIVALSTVLIFIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKLAKDAAKKHKLGLTHQLSRTFSRKKSVKQGEQANPAMSNSGLPPPPALASAAIKGQTKEPSNLTKMLDSFDDPNSNEGFNLKIGDKNIKKQMLKGKNLHTQSQILRYAYGQIEKEKAQQEKNNNLTFSGVISMASEVEEDIKSRPEIEVAFKDVTLTLKGKRKHILRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKIRGCTMTGSILVNGRPESIHCYQKIVGYVPQDDIVHGNLTVEENLRFSARCRLSDDMPKPDKVLIVERVIETLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREAAEGVNVCMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPNEGVTYQQLPVRWMIHNGYPVPPDMLHYANEISASSSSNVNHAIKGADDAADQSFADEFWEDMKSNVQLHKDHIEATFLSTKDLSGRRTPGVGRQYRYYLGRVGKQQLREAKAQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSMDKLQYWRESASGISSLAHFLAKDTIDLFSTIVKPLIYLSMFYFFSNPRSSFESNYVVLVCLVYCVTGMAYALAIYFEPAPAQLWAVLLPVVMTLIANQTRDTTFMKILIKMCYPNWALEAFIIANAERYTGVWLITRCSSLMSKGYNVNDWPICLAVLVFYGIVARIVAFICLMITQKK 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02572 1077 Pfam ABC transporter 493 641 IPR003439 GO:0005524
Mepo4g02572 1077 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 473 714 IPR003439 GO:0005524
Mepo4g02572 1077 SMART AAA_5 499 691 IPR003593 GO:0016887
Mepo4g02572 1077 CDD ABCG_EPDR 471 697 - -
Mepo4g02572 1077 MobiDBLite consensus disorder prediction 342 382 - -
Mepo4g02572 1077 Gene3D - 459 708 IPR027417 -
Mepo4g02572 1077 ProSitePatterns ABC transporters family signature. 614 628 IPR017871 GO:0005524|GO:0016887
Mepo4g02572 1077 FunFam ABC transporter G family member 24 467 709 - -
Mepo4g02572 1077 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 443 1064 - -
Mepo4g02572 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 696 IPR027417 -
Mepo4g02572 1077 Pfam ABC-2 type transporter 671 1077 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02572 Mepo-Chr4 34175316 34185251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02572 500 693 Calmodulin-binding Proteins AT2G36910 27.723 2.21e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02572 - - gmx:100812387 1771.52