Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02571 ATGAATTGTTTTCCATTCAACATCTACTACGGAGACAAGAAGGGTGATGCTAAAGGCTTGCAAATGCAATCACTCTCGGGTCTATCAAACAACTCTACTTATGGCGGGAGTGACATGAGAAGAACTGGTTCTGAATTGAATTCTCTGGATGCTTCCGACAACAGCTCCGACTCCCTTAGGAGGAATGCATTTCCCAATTTATCCCAAAGACCCAGCAACCTGAGAGTATTTACTGTATCTGAACTGAAATCAGCCACCAAAAATTTTGGTCGCTCTGTTATGCTTGGTGAGGGTGGATTCGGGTGTGTCTACAAGGGTTTGATCAAGAGTGTAGATGATCCTGCTAAAAAAATTGAAATTGCAGTTAAACAACTTGGTAAAAGAGGAATTCAGGGGCATAAGGAATGGGTGACTGAAGTGAATGTTCTTGGTATTGTCGAGCATCCCAATCTGGTGAAACTAGTTGGCTATTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTTTGGTATATGAATATATGCCCAACAGAAGCTTGGAACACCATTTATCCCCGCGATCAGAAACTCCTCTCCCGTGGAGTAGGAGACTGAAAATAGCCCAGGATGCTGCTCGCGGCTTAACATACCTCCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGACGAGCAGTGGAATGCAAAGCTGTCTGACTTTGGATTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCTGCTCCTGAATATATTCAAACAGGACGTCTCACTTCAAAGATTGATGTATGGAGCTACGGTGTTTTCCTCTATGAACTCATTACCGGCAGGCGTCCTTTAGATCGAAATCGCCCAAAGGGTGAGCAGCAGCTGTTGGAATGGATAAGACCATACCTTTCAGATGTGAAGAAGTTTCAAATAATTTTGGATCCAAGACTTGAGAGGAAAAACCTCTTAAAGTCAGCCCAAAAACTTGCTATAGTAGCTAACAGATGCTTGGTTAGAAACCCAAAGAATCGCCCTAAGATGAGTGAAGTATTAGAAATGGTTGATCGGATTGTGGAGTCTTCGGTGAGTACTAATCAACAACCTCCCTTGAATAGTGTAGCCTCAGCCGATGATTCTCAGGACACTGAAATAAATAACAAGAAGAGAATCATGGATCCAAAACCAGATTGTAATTGGTTTAGGTCGTGGAGACCAAAGCTTTTAAGAACATGCTGA 1284 0.426 MNCFPFNIYYGDKKGDAKGLQMQSLSGLSNNSTYGGSDMRRTGSELNSLDASDNSSDSLRRNAFPNLSQRPSNLRVFTVSELKSATKNFGRSVMLGEGGFGCVYKGLIKSVDDPAKKIEIAVKQLGKRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSLEHHLSPRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKIDVWSYGVFLYELITGRRPLDRNRPKGEQQLLEWIRPYLSDVKKFQIILDPRLERKNLLKSAQKLAIVANRCLVRNPKNRPKMSEVLEMVDRIVESSVSTNQQPPLNSVASADDSQDTEINNKKRIMDPKPDCNWFRSWRPKLLRTC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02571 427 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02571 427 Gene3D Transferase(Phosphotransferase) domain 1 175 397 - -
Mepo4g02571 427 Pfam Protein kinase domain 93 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02571 427 CDD STKc_IRAK 95 373 - -
Mepo4g02571 427 MobiDBLite consensus disorder prediction 377 399 - -
Mepo4g02571 427 MobiDBLite consensus disorder prediction 377 396 - -
Mepo4g02571 427 PANTHER OS01G0588500 PROTEIN-RELATED 58 372 - -
Mepo4g02571 427 Gene3D Phosphorylase Kinase; domain 1 69 174 - -
Mepo4g02571 427 FunFam Serine/threonine-protein kinase PCRK2 175 384 - -
Mepo4g02571 427 ProSitePatterns Protein kinases ATP-binding region signature. 95 123 IPR017441 GO:0005524
Mepo4g02571 427 FunFam Serine/threonine-protein kinase BIK1 56 174 - -
Mepo4g02571 427 MobiDBLite consensus disorder prediction 31 64 - -
Mepo4g02571 427 SUPERFAMILY Protein kinase-like (PK-like) 66 370 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02571 Mepo-Chr4 34165635 34170424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02571 1 367 Glycoside Hydrolase AT3G07070 42.973 9.55e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo4g02571 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02571 - - gmx:100305438 710.294