LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g02565	ATGAAGAAGGTTTCTCTCTATGCTTGTTTACTACTCAACTTGAGTTTTTTGGTTATTAATTTTCCACATAGCAAAGCTAGTCAAGCTGATAAACTTGTTCAGTTGATTCTATCTAGAAGCTCACAAAATCCTCCTAAGACCTTTTCTTGGGAAGTGGAAGATGCATCTAAATCACATTCTTCTTCTGCTGCTTATGTTGCACCTCAAGAGGGGCTAATGCAAGCTGACAAGATTGACACATTGCCTGGTCAACCATATGGAGTGAATTTTGACCAATATTCAGGCTATGTCACAGTTGATCCTGAGGCTGGAAGAGAACTTTTCTATTATTTTGTGGAGTCTCCATATAACTCTTCCACTAAACCTTTAGTTTTGTGGCTCAATGGAGGACCTGGCTGTTCTTCACTTGGGTATGGAGCCTTTCAGGAGTTAGGACCCTTCAGAATCAACTCTGATGGCAAAATACTATACCGTAACAATTATGCTTGGAATGAAGTGGCGAACGTACTCTTCTTGGAATCTCCAGCAGGAATAGGATTTTCCTACTCAAACACAACTTCTGACTATGACAATTCAGGAGATAAGTCAACTGCCAAGGATTCCTATGTCTTCCTTATCAACTGGCTGGAGAGATTTCCACAGTACAAAACAAGAGATTTTTACATAAGTGGAGAGAGTTATGCTGGTCATTATGTTCCTCAACTTGCATCCACTATTCTACACAACAATAAACTCTATAGCAACACCATTATTAACCTCAAAGGGATATCTTTAGGGAATGCTTGGATTGATGATGCTACAAGTTTAAAGGGGTTATATGATAACTTGTGGACTCATGCTTTGAACTCGGATCAAACTCATGAGTTGATTGAGAAGTACTGTGACTTCACTAAACAAAATTATTCAGCAATTTGTACCAATGCAATGAATATGTCCATGATTGAGACAGGAAAGATAGACTCCTTTAACATCTATGCTCCATTATGTCACGACTCTTCTCTGAAAAATGGTTCAACTGGTTCGGTAAGTAATGATTTTGACCCTTGTTCTGATTACTATGGTACTGCCTATCTAAATAGACCAGAGGTCCAAGAGGCTCTTCATGCAAAACCTACAAATTGGAGCCATTGCAGTGGTGATACAGATTCAGTGGGAGTCACAATTTCAAGATATCCAATCAACACCCTTAAGCTCCCTATTGACTCTGCTTGGCGTCCATGGTATTCTGGAAAAGAGATTGGAGGATATGTGGTGGGATACAAAGGATTGACATTTGCTACGGTAAGAGGATCAGGACATCTTGTTCCTAGCTGGCTACCCGAACGTGCTTTGACTTTGATCTCATCGTTCCTCTCTGGAAATCTGCCTCCTTCACCAATAAGTTAA	1386	0.3997	MKKVSLYACLLLNLSFLVINFPHSKASQADKLVQLILSRSSQNPPKTFSWEVEDASKSHSSSAAYVAPQEGLMQADKIDTLPGQPYGVNFDQYSGYVTVDPEAGRELFYYFVESPYNSSTKPLVLWLNGGPGCSSLGYGAFQELGPFRINSDGKILYRNNYAWNEVANVLFLESPAGIGFSYSNTTSDYDNSGDKSTAKDSYVFLINWLERFPQYKTRDFYISGESYAGHYVPQLASTILHNNKLYSNTIINLKGISLGNAWIDDATSLKGLYDNLWTHALNSDQTHELIEKYCDFTKQNYSAICTNAMNMSMIETGKIDSFNIYAPLCHDSSLKNGSTGSVSNDFDPCSDYYGTAYLNRPEVQEALHAKPTNWSHCSGDTDSVGVTISRYPINTLKLPIDSAWRPWYSGKEIGGYVVGYKGLTFATVRGSGHLVPSWLPERALTLISSFLSGNLPPSPIS	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g02565	461	SUPERFAMILY	alpha/beta-Hydrolases	78	453	IPR029058	-
	Mepo4g02565	461	ProSitePatterns	Serine carboxypeptidases, histidine active site.	423	440	IPR033124	GO:0004185
	Mepo4g02565	461	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	77	438	IPR001563	GO:0004185\|GO:0006508
	Mepo4g02565	461	Pfam	Serine carboxypeptidase	82	380	IPR001563	GO:0004185\|GO:0006508
	Mepo4g02565	461	FunFam	Carboxypeptidase	72	331	-	-
	Mepo4g02565	461	Gene3D	-	349	379	-	-
	Mepo4g02565	461	Gene3D	-	380	455	-	-
	Mepo4g02565	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	159	171	IPR001563	GO:0004185\|GO:0006508
	Mepo4g02565	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	172	182	IPR001563	GO:0004185\|GO:0006508
	Mepo4g02565	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	208	233	IPR001563	GO:0004185\|GO:0006508
	Mepo4g02565	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	423	436	IPR001563	GO:0004185\|GO:0006508
	Mepo4g02565	461	ProSitePatterns	Serine carboxypeptidases, serine active site.	222	229	IPR018202	GO:0004185
	Mepo4g02565	461	Gene3D	alpha/beta hydrolase	73	331	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g02565	Mepo-Chr4	34095866	34098360	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g02565	378	454	Calmodulin-binding Proteins	AT2G22960	32.911	3.82e-06	45.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g02565	K16297		-	mtr:11443022	838.18