Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02542 ATGGTTCTTTCTTTTGTTGGAAAGATACAAAAAGGAATTTCACACTTTGTACACAAAAGACATGATTTCAGTGAAGAGTTAGTGCCCGAAGATGTTAGGGAAGGGTACTTTGCTGTTGTTGCAATGAAGGATGGAGAATTTAAAAGGTTTATCATTGGTCTAGAATACTTGAGTGATCCTGAATTCTTGGGACTGCTTGATGAAGCTCAGGAAGAGTATGATTTTATACACAAAGGAGCTATTGCTGTTCCTTGTCTGCCTCAACAATTACAGAACATTCTAGATGGTCATAGATGA 297 0.3737 MVLSFVGKIQKGISHFVHKRHDFSEELVPEDVREGYFAVVAMKDGEFKRFIIGLEYLSDPEFLGLLDEAQEEYDFIHKGAIAVPCLPQQLQNILDGHR 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02542 98 Pfam Auxin responsive protein 26 94 IPR003676 GO:0009733
Mepo4g02542 98 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02542 Mepo-Chr4 33883711 33884007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02542 29 85 Calmodulin-binding Proteins AT3G43120 47.368 3.83e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02542 - K14488 gmx:100775971 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03355 3 43605367 43606198 Mepo4g02542 4 33883711 33884007 PCT