Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02538 ATGCTTAGTTCTTTTGTTGGTAAAGTACAAAAGAGTTTATCACTCTTTGTACCAAGAAAGCATGCATTGAGCTACTGGAGTGAAGATCATGCCACAACTGGGCTTGCCGATGATGTCTTGAAAGGTTACTTTGCTGTTCTTGCAAAGAAGGGTGTAGAAACTAGAAGGTTTATTGTTGGATTAGATTACTTAACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTGGGAGGAATATGGTTTCAGGCAGAAGGGAACTCTTGTGGTTCCATGTAGGCCGATAGAATTACAGAACATTTTAGATGGTCGGAAAACATGGAGAAGACACAACACCGTTGAAGGAAATGTTCATATTCCGGAGTCAAGATCCTCTTTATTTCGGAAAAGAAATGAATGA 399 0.396 MLSSFVGKVQKSLSLFVPRKHALSYWSEDHATTGLADDVLKGYFAVLAKKGVETRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIELQNILDGRKTWRRHNTVEGNVHIPESRSSLFRKRNE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02538 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 99 IPR003676 GO:0009733
Mepo4g02538 132 Pfam Auxin responsive protein 31 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02538 Mepo-Chr4 33840459 33840857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02538 39 101 Calmodulin-binding Proteins AT2G24400 42.857 1.45e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02538 - K14488 tpra:123895443 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02538 4 33840459 33840857 Mepo4g02538 4 33840459 33840857 ECH