Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02524 ATGTCACAAGATTCTGATGAAACTATAAAAACCTCTGAGGAATGGAAATGGTCTGAAATGCAAGGTGAACATTCATTATCTAAGGAACAAATGGAAGAAGAAGCTTCGTTACCAAACAACAAAAGTTGTGATGTTTCTAATGGAAATGAGAAGGTTAAGAATGTTGCTTCTGTTGGGTTTTGTGAGCTTTTTAGATTTGCTGATGGGTTGGATTATGTTCTTATGACAATTGGAAGTTTAGGAGCTATTGTTCATGGTTGTTCTTTGCCGCTGTTTCTTCGGTTTTTCGCTGATCTTGTTAATTCTTTTGGTTCTAATGCTAATAATTTGGATAAGATGACCCAAGAAGTTGCTAAGTATGCTCTTTACTTTCTGGTTGTTGGTGCTGCTATTTGGGCATCTTCATGGGCAGAGATTTCTTGTTGGATGTGGACTGGTGAGAGACAATCAACAAGGATGAGAATTAAGTATCTTGAAGCTGCTTTGGATCAAGATATTCAATTCTTTGATACCGAAGTTCGAACTTCCGATGTTGTTTTCGCTATTAACAGTGATGCTGTCATGGTACAAGATGCCATAAGTGAGAAGTTAGGTAATTTTGTTCACTACATGGCTACATTTGTTTCTGGATTTGCTGTTGGTTTCACTGCTGTTTGGCAATTAGCATTGGTTACACTTGCTGTGGTTCCTATGATAGCTGTAATAGGAGGCATTCATACTACCACTTTGGCCAAGTTATCTGGTAAAAGTCAAAAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACTGTTGTGCAAATTAGAGTGGTTTTAGCATTTGTTGGGGAGACAAAAGCACTACAAGGCTATTCATCTGCTTTGAGGGCTTCTCAAAAGATTGGTTACAGAACTGGATTTGCAAAGGGAATTGGATTAGGTGCTACTTACTTTGTTGTTTTCTGCTGTTATGCACTTTTGTTATGGTATGGAGGCTATTTGGTTAGGCATGACTACACTAATGGTGGACTTGCAATTTCTACCATGTTTGCTGTCATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCAAGCATGGTTGCATTTACAAAGGCAAGAGTTGCAGCTGCGAAAATCTTCGGTGTGATCGATCACAAGCCTTGTATAGACAAGAAAAGTGAATCAGGTTTGGAGTTAGAAACTGTGACTGGACTAGTGGAGCTTAAAAATGTAGACTTTTCATATCCATCAAGACCTGAAGTTCAGATCCTTCACAGTTTCTCCTTGAGTGTTCCTTCTGGGAAGACCATAGCTTTGGTTGGAAGTAGTGGCTCTGGCAAGAGCACCATTGTGTCCCTCATTGAAAGATTCTACGACCCTTCTTCTGGACAGGTTTTGCTAGATAGACATGATGTGAAGACATTGAAGCTTAAATGGTTGAGACAACAGATAGGACTTGTGAGCCAAGAGCCTGCTTTATTTGCCACCACAATTAGAGAAAATATATTGTTGGGCAGGCCTGATGCTGATCAGGTTGAGATTGAAGAAGCTGCTAGAGTAGCTAATGCTCATTCATTCATCATCAAACTTCCTGATGGTTATGAAACTCAGGTAGGGGAAAGAGGGCTGCAATTATCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCACTGGACTCTGAATCAGAAAAGCTGGTTCAAGAAGCTCTTGATAGGTTCATGATTGGTAGAACAACTCTTGTAATTGCGCATCGCCTCTCTACTATTCGCCAAGCTGACCTTGTTGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAACTCTTTGCTAAAGGCGAAAATGGAATTTATGCCAAGCTTATCAAAATGCAGGAGATGGCAAATGAAAGTTCCATGAGCAATGCCAGAAAGAGTAGTGCAAGACCTTCAAGCGCTAGAAACTCTGTAAGCTCACCGATAATTACTCGGAATTCTTCATATGGTGGCCGGTCCCCGTACTCAAGGAGGTTGTCGGACTTCTCTACATCGGACTTTAGTCTGTCCTTCGATGCATCACATCCAAACTTTAGGCTTGAAAAGCTTGCCTTCAAAGACCAAGCTAGTTCCTTCTGGCGACTTGCGAAAATGAACTCTCCTGAATGGCTATATGCATTGATTGGATCCCTAGGCTCCATTGTTTGTGGATCCCTAAGTGCATTCTTTGCTTATGTTCTCAGTGCTGTACTCAGTGTCTATTACAATCCAAGCCACAAACACATGATTAGAGAAATTGAAAAATACTGCTACTTGTTAATTGGCCTTTCATCGGCTGCACTCGTATTCAATACATTGCAGCACTTCTTCTGGGATACTGTCGGCGAAAATCTGACTAAACGAGTGCGAGAGAAAATGTTGAGGGCGGTGCTTAAAAATGAAATGGCGTGGTTTGATCGAGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTAGCTCTTGATGCCAACAATGTTAGATCTGCCATTGGAGATCGGATTTCGGTAATTGTGCAGAACACTGCACTTATGCTTGTTGCTTGTACTGCAGGGTTTGTATTGCAGTGGCGCCTTGCCCTTGTCCTCGTTGCTGTCTTCCCGGTTGTTGTTGCAGCAACCGTTTTGCAGAAAATGTTCATGACTGGCTTCTCTGGTGACTTGGAAGCCGCTCATGCTAAGGCTACACAACTAGCTGGAGAGGCTATAGCCAATGTAAGGACTGTTGCCGCCTTTAATTCGGAAAAGAAAATTGTTGGCCTTTTCGCCTCAAACCTTGAAACTCCACTACGACGCTGTTTTTGGAAGGGACAAATTTCTGGAAGCGGATATGGAATAGCACAGTTTGCACTCTATGCTTCATATGCTCTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAACACGGCATCTCTGATTTCTCTAAGACAATCCAAGTTTTTATGGTCCTCATGGTCTCTGCTAATGGTGCTGCCGAAACTTTAACCTTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAAGTCGGTTTTTGATCTCCTTGACCGTAGAACTGAAATTGAGCCAGATGATCCGGATGCTGTCGTTGTCCCTGACCGTCTTCGTGGGGAAGTAGAACTCAAGCATGTTGACTTCTCTTATCCGAGCCGACCAGATATGCCTGTTTTCCGCGACCTTAGTCTTCGTGCAAGGGCAGGTAAAACTCTTGCCCTTGTAGGTCCTAGTGGATGCGGTAAGAGCTCAGTTATTGCACTCATACAAAGATTCTACGATCCAACGTCCGGCCGAGTCACAATTGATGGAAAGGACATAAGGAAATATAATCTCAAGTCCCTTAGAAGACACATTGCTGTGGTGCCTCAAGAGCCATGCCTATTCGCTACTACTATTTATGAAAACATTGCTTATGGACATGAATCTGCTACCGAAGCCGAGATTATTGAGGCTGCAACTCTTTCCAATGCTCACAAATTCATATCTTCTCTGCCAGATGGATACAAGACATTTGTTGGCGAACGAGGAGTTCAATTATCCGGCGGACAGAAGCAAAGAATAGCGATTGCTCGAGCTTTTGTACGAAAGGCAGAACTTATGCTTCTTGATGAAGCAACAAGTGCACTTGATGCCGAATCCGAGAGGTCTGTTCAGGAGGCCCTCGAACGTGCCTGCTCGGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATAAGGAATGCCAATCTCATTGCAGTGATTGATGATGGGACAGTTGAAGAACAAGGCTCACATTCACATTTGTTGAAAAATCACCCGGATGGGATCTATGCACGCATGATTCAACTGCAAAGGTTAACAAATAGCCAAGTCGTTGGGACGACCTCGAGTTCGAGTTCTTCAGCAAGAACAAAAGAAGATGAAAGAGAAAGCTAG 3966 0.4289 MSQDSDETIKTSEEWKWSEMQGEHSLSKEQMEEEASLPNNKSCDVSNGNEKVKNVASVGFCELFRFADGLDYVLMTIGSLGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVAKYALYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIKYLEAALDQDIQFFDTEVRTSDVVFAINSDAVMVQDAISEKLGNFVHYMATFVSGFAVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSGKSQKALSQAGNIVEQTVVQIRVVLAFVGETKALQGYSSALRASQKIGYRTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHDYTNGGLAISTMFAVMIGGLALGQSAPSMVAFTKARVAAAKIFGVIDHKPCIDKKSESGLELETVTGLVELKNVDFSYPSRPEVQILHSFSLSVPSGKTIALVGSSGSGKSTIVSLIERFYDPSSGQVLLDRHDVKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRQADLVAVLQQGSVSEIGTHDELFAKGENGIYAKLIKMQEMANESSMSNARKSSARPSSARNSVSSPIITRNSSYGGRSPYSRRLSDFSTSDFSLSFDASHPNFRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSLGSIVCGSLSAFFAYVLSAVLSVYYNPSHKHMIREIEKYCYLLIGLSSAALVFNTLQHFFWDTVGENLTKRVREKMLRAVLKNEMAWFDREENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFASNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIQVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRRTEIEPDDPDAVVVPDRLRGEVELKHVDFSYPSRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVTIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEIIEAATLSNAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALERACSGKTTIIVAHRLSTIRNANLIAVIDDGTVEEQGSHSHLLKNHPDGIYARMIQLQRLTNSQVVGTTSSSSSSARTKEDERES 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02524 1321 CDD ABC_6TM_Pgp_ABCB1_D1_like 75 372 - -
Mepo4g02524 1321 ProSitePatterns ABC transporters family signature. 1194 1208 IPR017871 GO:0005524|GO:0016887
Mepo4g02524 1321 Gene3D - 397 662 IPR027417 -
Mepo4g02524 1321 CDD ABC_MTABC3_MDL1_MDL2 1055 1294 - -
Mepo4g02524 1321 SUPERFAMILY ABC transporter transmembrane region 63 383 IPR036640 GO:0005524|GO:0016020
Mepo4g02524 1321 SMART AAA_5 426 612 IPR003593 GO:0016887
Mepo4g02524 1321 SMART AAA_5 1082 1274 IPR003593 GO:0016887
Mepo4g02524 1321 Pfam ABC transporter 1074 1222 IPR003439 GO:0005524
Mepo4g02524 1321 MobiDBLite consensus disorder prediction 1299 1321 - -
Mepo4g02524 1321 MobiDBLite consensus disorder prediction 1 43 - -
Mepo4g02524 1321 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 732 1019 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g02524 1321 FunFam ABC transporter B family member 1 1045 1295 - -
Mepo4g02524 1321 PANTHER ABC TRANSPORTER B FAMILY 46 782 IPR039421 -
Mepo4g02524 1321 Gene3D ABC transporter type 1, transmembrane domain 122 1028 IPR036640 GO:0005524|GO:0016020
Mepo4g02524 1321 FunFam ABC transporter B family member 1 389 639 - -
Mepo4g02524 1321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 638 IPR027417 -
Mepo4g02524 1321 CDD ABC_MTABC3_MDL1_MDL2 399 638 - -
Mepo4g02524 1321 Pfam ABC transporter 417 566 IPR003439 GO:0005524
Mepo4g02524 1321 CDD ABC_6TM_Pgp_ABCB1_D2_like 721 1037 - -
Mepo4g02524 1321 FunFam ABC transporter B family member 19 1021 1043 - -
Mepo4g02524 1321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1046 1294 IPR027417 -
Mepo4g02524 1321 SUPERFAMILY ABC transporter transmembrane region 719 1039 IPR036640 GO:0005524|GO:0016020
Mepo4g02524 1321 ProSitePatterns ABC transporters family signature. 538 552 IPR017871 GO:0005524|GO:0016887
Mepo4g02524 1321 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1055 1291 IPR003439 GO:0005524
Mepo4g02524 1321 FunFam ABC transporter B family member 1 62 397 - -
Mepo4g02524 1321 Gene3D - 1045 1302 IPR027417 -
Mepo4g02524 1321 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 399 635 IPR003439 GO:0005524
Mepo4g02524 1321 Pfam ABC transporter transmembrane region 76 348 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g02524 1321 Pfam ABC transporter transmembrane region 733 1002 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g02524 1321 MobiDBLite consensus disorder prediction 645 678 - -
Mepo4g02524 1321 MobiDBLite consensus disorder prediction 7 35 - -
Mepo4g02524 1321 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 77 364 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g02524 1321 FunFam ABC transporter B family member 1 711 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02524 Mepo-Chr4 33657079 33664386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02524 51 1318 Calmodulin-binding Proteins AT2G36910 87.155 0.0 2263