Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02522 ATGACGTATTCCTCACCAAGACAACCCATCAACCTTCCCACCGATCCCAACCTCTCCCTAACCTCCTTCCTCTTCCAATCCACTTCCTCCGTGGCCGACACCATCGCCATCGCTGACGCTGAAACCGGCAACTACCTAACCTTCCGCCAGCTCAAAATCCATGTCTCCTCCCTCTCCCACTCTTTACTTCGCCTCGGAATTAAACGAGGCGACGTGGTTTTGCTATTAGCACCGAACTCTATACGCTTCCCTGTTTGCTTTCTTGCTATAGTCGCCATAGGTGCTATTGCCACCACAAGTAGTCCTTTATACACCCTCTCCGAACTCTCTAGACAAATCAATGACTCCAAACCTAAGCTTGTTATAACCGTATCTGAACTCTTCAAGAAAATCGAAGCATTGACCTTAGCTTTACCATTAATATTCCTCGACAATCCTTCCAAGAAGTTTGGTTCTAGGGTTTCAAGCTACGAGGATCTGATCAGAGAGTCATACAATAGCTCCAATGATATTCCGGTGAACAGAGATGTGTCTCAATCCGACGTGGCGGCGATTCTTTATTCTTCAGGCACCACAGGTAGAAGCAAGGGAGTGATGCTGACTCACCGGAACTTAATAGCTACGGCGGTGGCAGGAGCGGTGGATCAAGACCAGAACGGCGAAGGGAAGAACGTGTTTGTGTGTTTTGTGCCAATGCACCACGTGATGGGGTTGGTGGGGATAACGTACACACAGCTGAGGAGAGGGAACACGGTGGTGTCGATGGGTGGTAGATTTGATTTGGAGAAGATTTTTGCGGCGGTGGATAAGTTTAAGGTGACGCATTTGTATGTTGCTCCGCCGGTGATAGTGGAGCTGATCAAGCGGCGTGACGTTGTTAGCGGTTATGAGTTATCGTCGCTGAAGTATCTTGTCGGTGGTGCTGCTCCGTTGGGGAAAGATTTGATGCAAGAGTGTATTAAGATTCTTCCTCGTGTCCACGTTATTCAGGGGTATGGCATGACTGAAGCATGTGGACTTGTTTCCATAGAAAATCCAAAGGAAGGAAGTCTCCATTCAGTTTCTGGTTCAACCGGAACACTAATTCCAAGTGTAGAATCTCGTATAATTAATTTGGCAACATTGAAGCCCCTTCCACCGAATCAATTAGGGGAAATTTGGCTACGAGGACCTACTATAATGCAAGGATACTTTAACAATCCTGAAGCAACAAAGCTGGCCATTAATGATCAAGGTTGGATGATTACAGGAGATCTTGGATATTTTGACGAAAAGGGGCAACTATTTGTTGTGGATCGAATAAAAGAGCTCATCAAATGTAGTGGTTATCAAGTCGCGCCAGCTGAGCTTGAAGACTTGTTGGTTTCTCATCCTGAAATTTCTGATGCCGGGGTGATACCGTCTCCTGATGCCAAAGCTGGTGAGGTTCCAGTTGCTTTTGTTGTTCGCTCACTCAATAGCTCGATAAGCGAAGAAGACATCAAGAAGTTTGTAGCAAAAGAGGTTGCACCATACAAAAGGTTGCGGCGAGTGACTTTTATAGAGAAGATTCCAAAGTCACCCACAGGAAAGATTTTAAGAAAGGATCTCGTAATTTTAGATCGACAAATGATATCAAAGTTATAA 1626 0.4569 MTYSSPRQPINLPTDPNLSLTSFLFQSTSSVADTIAIADAETGNYLTFRQLKIHVSSLSHSLLRLGIKRGDVVLLLAPNSIRFPVCFLAIVAIGAIATTSSPLYTLSELSRQINDSKPKLVITVSELFKKIEALTLALPLIFLDNPSKKFGSRVSSYEDLIRESYNSSNDIPVNRDVSQSDVAAILYSSGTTGRSKGVMLTHRNLIATAVAGAVDQDQNGEGKNVFVCFVPMHHVMGLVGITYTQLRRGNTVVSMGGRFDLEKIFAAVDKFKVTHLYVAPPVIVELIKRRDVVSGYELSSLKYLVGGAAPLGKDLMQECIKILPRVHVIQGYGMTEACGLVSIENPKEGSLHSVSGSTGTLIPSVESRIINLATLKPLPPNQLGEIWLRGPTIMQGYFNNPEATKLAINDQGWMITGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDAKAGEVPVAFVVRSLNSSISEEDIKKFVAKEVAPYKRLRRVTFIEKIPKSPTGKILRKDLVILDRQMISKL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02522 541 Gene3D - 436 537 IPR045851 -
Mepo4g02522 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 531 - -
Mepo4g02522 541 CDD 4CL 12 530 - -
Mepo4g02522 541 Pfam AMP-binding enzyme 31 440 IPR000873 -
Mepo4g02522 541 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Mepo4g02522 541 Gene3D - 3 435 IPR042099 -
Mepo4g02522 541 FunFam Long-chain-fatty-acid--CoA ligase FadD 4 435 - -
Mepo4g02522 541 FunFam 4-coumarate--CoA ligase 2 436 535 - -
Mepo4g02522 541 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Mepo4g02522 541 SUPERFAMILY Acetyl-CoA synthetase-like 16 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02522 Mepo-Chr4 33624290 33646941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02522 3 541 Monolignol Biosynthesis Gene Families AT4G05160 55.699 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02522 K01904 - mtr:25483961 957.977