Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02509 ATGCAAGGAGAAAATTTGCGTAAGGGAACTTGGCTTCAAGAGGAAGATGAACAATTGATAAGCTTTGTGACCCGTCTCGGGGAACGAAGATGGGATTCCCTTGCTAAAGTAGCTGGACTTAGGAGAAGTGGTAAAAGCTGTAGGTTAAGGTGGTTGAACTATCTTCGACCAAATCTCAAACATGGCCCTTTTAGTGTTGAAGAAGAGAGACTTATAGTTCAATTTCAGCAGCAATGGGGTAACAAGTGGTCCAAGATTGCTCGTAGGCTTTCAGGAAGAACAGACAATGAAATAAAAAACTATTGGAGAACTCATTTACAAAAGAGAGTACAAGTTCAACAAGAAGGTGAGTTCATGTATGAAGTAGAAAACGTAGCAGATGATTTCAACAACAAAAGCATTGATGTGGTTTCCAACAGTGAGGGAGACACAAAGGATAGCTCCATAGACAGTTGTTCCTTATCAGATTGGGGAATGAGAAACTCACCTTATCATGAAAGTAGGATATCAGATTGGATAGAAGAATTGCAAAATGGATATGGTGACAAGGAAAAGGAACTAGGCCAAGATTTTAGTGGCATTAATAATGGATCAATGTATGAATATAATCCCCAACTAGAATATGATACTTGGGATTATTCAGGTTTTCTGTGGGACTTATGA 663 0.3891 MQGENLRKGTWLQEEDEQLISFVTRLGERRWDSLAKVAGLRRSGKSCRLRWLNYLRPNLKHGPFSVEEERLIVQFQQQWGNKWSKIARRLSGRTDNEIKNYWRTHLQKRVQVQQEGEFMYEVENVADDFNNKSIDVVSNSEGDTKDSSIDSCSLSDWGMRNSPYHESRISDWIEELQNGYGDKEKELGQDFSGINNGSMYEYNPQLEYDTWDYSGFLWDL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02509 220 Gene3D - 8 60 - -
Mepo4g02509 220 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Mepo4g02509 220 Gene3D - 62 128 - -
Mepo4g02509 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Mepo4g02509 220 CDD SANT 63 106 IPR001005 -
Mepo4g02509 220 FunFam Myb transcription factor 8 60 - -
Mepo4g02509 220 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Mepo4g02509 220 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Mepo4g02509 220 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Mepo4g02509 220 CDD SANT 10 55 IPR001005 -
Mepo4g02509 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Mepo4g02509 220 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Mepo4g02509 220 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 119 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mepo4g02509 220 SMART sant 7 57 IPR001005 -
Mepo4g02509 220 SMART sant 60 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02509 Mepo-Chr4 33504916 33506539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02509 4 111 MYB Transcription Factor Family AT5G59780 61.111 3.29e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g02509 Myb_DNA-binding 8.2e-14 CL0123