Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02498 ATGGCGGTTCCAGGAAGACGCAATGGTTTGAACGAAGAAGACGATGAAGAATCGAATGGTCTTTTCGGAGAAGAAGGTCTTGTTCCTGAAGAATCTGATACTCCTCCTCATCTTCGTGACCTCTCCCATGCCGCCACACACGGTGACCTCAACGCCCTCCGCCTCGCTCTCGATAACTTGAGTGGTAGTATTGATGAACCGGTGGAGGATGGGGATACTGCTCTTCATTTGACCTGTTTATATGGCCATTTTGAATGTGCTCAGCTGCTACTAGAAAGAGGAGCAAACTTGGAGGCTACAGATGAAGATGGGGCAATTCCTTTACACGATGCGTGTGCAGGAGGATTTATAAATATAGTCCAACTTCTACTTAACAGAGCTAACAATGCTGAGCATATAAAAAGGATGCTAGAATCTGTTGATTCTGAGGGTGATACTCCTCTTCATCATGCTGCAAGAGGTGAGCATGCTGATGTAATTAGGTTGTTGCTGTCTAATGGTGCATCATCCACAAAGCAAAACTTATATGGAAAGACCCCTGCAGAGTTACCTGAACCTGGCACAGATGCAAGGAGGCTGTTTGAAGCTACTGCTACTGCCATGGAAATCTAA 612 0.4575 MAVPGRRNGLNEEDDEESNGLFGEEGLVPEESDTPPHLRDLSHAATHGDLNALRLALDNLSGSIDEPVEDGDTALHLTCLYGHFECAQLLLERGANLEATDEDGAIPLHDACAGGFINIVQLLLNRANNAEHIKRMLESVDSEGDTPLHHAARGEHADVIRLLLSNGASSTKQNLYGKTPAELPEPGTDARRLFEATATAMEI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02498 203 SUPERFAMILY Ankyrin repeat 39 183 IPR036770 -
Mepo4g02498 203 MobiDBLite consensus disorder prediction 1 42 - -
Mepo4g02498 203 ProSiteProfiles Ankyrin repeat region circular profile. 103 129 - -
Mepo4g02498 203 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Mepo4g02498 203 SMART ANK_2a 143 172 IPR002110 GO:0005515
Mepo4g02498 203 SMART ANK_2a 103 132 IPR002110 GO:0005515
Mepo4g02498 203 SMART ANK_2a 70 99 IPR002110 GO:0005515
Mepo4g02498 203 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Mepo4g02498 203 Pfam Ankyrin repeats (3 copies) 41 101 IPR002110 GO:0005515
Mepo4g02498 203 Pfam Ankyrin repeats (3 copies) 103 173 IPR002110 GO:0005515
Mepo4g02498 203 ProSiteProfiles Ankyrin repeat region circular profile. 143 169 - -
Mepo4g02498 203 FunFam BRCA1-associated RING domain protein 1 35 202 - -
Mepo4g02498 203 PANTHER SOWAH (DROSOPHILA) HOMOLOG 34 198 - -
Mepo4g02498 203 ProSiteProfiles Ankyrin repeat profile. 103 135 IPR002110 GO:0005515
Mepo4g02498 203 ProSiteProfiles Ankyrin repeat profile. 143 175 IPR002110 GO:0005515
Mepo4g02498 203 Gene3D - 35 201 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02498 Mepo-Chr4 33354832 33357450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02498 10 185 Ion Channels AT2G25600 28.780 1.47e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02498 - - gmx:100527544 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02498 4 33354832 33357450 Mepo4g02498 4 33354832 33357450 ECH