Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02477 ATGGAAACCGACACATGCAAGAGTAAGATTCAGATAAACGGTTACTTCGTTTACACACGCCGAAAGCGTAATCATCATCGCGATTCCGATAACGAAGAACCGAAGAGGCTGAAAATCGATGAAAATGTGGAGGCCGTGAAGAACGACGTCGTTAAATGGACTTCGAAACGGCAACGGCGGCCGTCGTTTAAGGTGAAAGTTGATTCCGGTGAAGATGTTTCTGCTGCTGCTAAACTCGCTGCTGAGAGTGTTAAGATTGAGAAGAACGAAACGGTTGGTGAGAAGTGGTTGACTATGAAGGAGCTTTTTGATACTGGTTTTCTTGATGGTGTTGCTGTTGTCTATGTCGGTTGCAAAAAAGAGGCTATAAATTCGAGACTGGAGGGTGTGATTGCTGGTGGGGGGATATTGTGCTCGTGCTGTCTGTGCAATGGACGCAGAATTATTCCCCCCTCCACGTTTGAGATTCATGCCTGTAATATATATAAGAGAGCAACACAGTATATTTGCTTTGAAAATGGGAAGAGTCTTCTTGAGTTATTGGGAGTATGCAGGGCGGCTCCCTCACATTCTATGGAAGCCACCATTCAAAATTTTCTTTGTTTACCGCCTGAAGAGAAGTATTTTACTTGCAGGAGCTGCAGAGGGGCTTTCCCTGTTTCAACTGTGAAAAGAGTGGGGCTTATATGCCATTCTTGCGTGGAAGCAAGCAAATCTGAAGACAGTCCTATTCGTGGAGTTGGCAAAAGAGTCAGGACTCCTCGACCATATCTGTTCTCTAGTCCATCTAGTATTTCTGAAACGTGTATGTCATCACAAACTAAGAAACAACAGAAGAAGAGAACAAAGTCATCAAAACGGCTCAGCATGTCAAAATCTTCCAAGAAGAGTGCTTCTGTGGCTATTCTTACGCAGAAGAAAAGTTTGTGCAGCATGGAAACAAAGTCATCAAAAGTGTCAGTCAAGTTGAAGATTGCTCCAATTACTTCAAATTCGCAGTGTTCATCTCCACCAAATAAGAGTCAGTTGAGGATCAATAAGAAGCATCAGCGATTGCATAAATTAATTTTTGACGAAGATGGATTGCCTGATGGAGCCGAAGTAGCTTATTATGCACGTGGACAGAAACGGCTTGAGGGTATCAAAAAGAAATCCGGAATTCTTTGTCGATGCTGTAACACTGAGATCAGCCCCGCACAGTTTGAGGTTCATGCAGGGTGGGCTTCTCGCAGGAAGCCTTATGCATACATCTACACGTCGAATGGGGTGTCTCTCCATGAGTTGGCATTATTCCTCTCAAAAGATCGCAAATGCACTGCTAAATATAATGATCTTGCATGCATTGTTTGTTGGGATGGTGGAAATTTGTTTCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTACTCCACGACGTGGTCGGTACTGTCCAATCTGTCAACACATGTTCCTTGGAGAAGGATCTGTGGCTCTCAATCCTGATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATAGAACAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACTTTGAAGCGGAGACTGGTGGATGTGCTTTATGCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGTACAATAATAATTTGTGATCAGTGTGAAAAGGAATATCATGTGGGCTGTTTGAGGGATCATAAAATGGCATATTTGAAGGAATTGCCGGAAGGGGACTGGCTTTGTTGCAATGATTGCACAAGAATTCATTCTATTTTGGAGAACCTCTTAGTTAGGGAAGCTGAGAAACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGATAGATGTTTGGAACCCCTTAATGAGATTGATATAAGATGGAGACTTGTTAATGGCAAAGTTGCTTCTCCTGAAACCAGGCCGTTGCTTTTGGAGGCCCTGTCAATATTCAATGAATGCTTTGATCCTATAGTTGACGCAGCTACTGAACGTGACCTTATTCCTTCCATGGTTTATGGACGGAATTTGCAGACTCAAGATTTTGGAGGAGTGTACTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGGCATGCTACGGATTTTTGGTACAGATATTGCAGAACTCCCATTAATTGCTACCAGACACAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTCTCGTGCATTGAAAGGCTGGTGGCCTTCTTGAATGTGAAGAACCTTGTGTTACCAGCTGCTGAAGAAGCAGAATCCATATGGAAATATAAATTTGGGTTTAGCAGGACGAAACCTGAGCAGCTTACCAACTTTAGAAAGAACTGCCAACAGTTGATGGCATTCAAAGGGACAGTTATGCTTCACAAATCGGTGCCTCGATGTCGGATCATTCATAGTCAGTCATGA 2439 0.4334 METDTCKSKIQINGYFVYTRRKRNHHRDSDNEEPKRLKIDENVEAVKNDVVKWTSKRQRRPSFKVKVDSGEDVSAAAKLAAESVKIEKNETVGEKWLTMKELFDTGFLDGVAVVYVGCKKEAINSRLEGVIAGGGILCSCCLCNGRRIIPPSTFEIHACNIYKRATQYICFENGKSLLELLGVCRAAPSHSMEATIQNFLCLPPEEKYFTCRSCRGAFPVSTVKRVGLICHSCVEASKSEDSPIRGVGKRVRTPRPYLFSSPSSISETCMSSQTKKQQKKRTKSSKRLSMSKSSKKSASVAILTQKKSLCSMETKSSKVSVKLKIAPITSNSQCSSPPNKSQLRINKKHQRLHKLIFDEDGLPDGAEVAYYARGQKRLEGIKKKSGILCRCCNTEISPAQFEVHAGWASRRKPYAYIYTSNGVSLHELALFLSKDRKCTAKYNDLACIVCWDGGNLFLCDGCPRAFHKECASVSSTPRRGRYCPICQHMFLGEGSVALNPDAVAAGRVEGVDPIEQIAKRCIRIVKDFEAETGGCALCRGSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCTRIHSILENLLVREAEKLPESLLDVIKKKQEDRCLEPLNEIDIRWRLVNGKVASPETRPLLLEALSIFNECFDPIVDAATERDLIPSMVYGRNLQTQDFGGVYCALLMVNSSVVSAGMLRIFGTDIAELPLIATRHKNRGKGYFQTLFSCIERLVAFLNVKNLVLPAAEEAESIWKYKFGFSRTKPEQLTNFRKNCQQLMAFKGTVMLHKSVPRCRIIHSQS 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02477 812 MobiDBLite consensus disorder prediction 257 275 - -
Mepo4g02477 812 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 531 593 - -
Mepo4g02477 812 SUPERFAMILY FYVE/PHD zinc finger 526 588 IPR011011 -
Mepo4g02477 812 MobiDBLite consensus disorder prediction 244 299 - -
Mepo4g02477 812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 531 593 IPR013083 -
Mepo4g02477 812 SUPERFAMILY FYVE/PHD zinc finger 442 489 IPR011011 -
Mepo4g02477 812 PANTHER AUTOIMMUNE REGULATOR 50 801 - -
Mepo4g02477 812 Pfam Tify domain binding domain 129 181 IPR032308 -
Mepo4g02477 812 Pfam Tify domain binding domain 383 429 IPR032308 -
Mepo4g02477 812 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 684 776 IPR016181 -
Mepo4g02477 812 Gene3D - 631 798 - -
Mepo4g02477 812 SMART PHD_3 534 591 IPR001965 -
Mepo4g02477 812 SMART PHD_3 446 487 IPR001965 -
Mepo4g02477 812 ProSiteProfiles Zinc finger PHD-type profile. 444 489 IPR019787 -
Mepo4g02477 812 MobiDBLite consensus disorder prediction 276 290 - -
Mepo4g02477 812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 433 521 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02477 Mepo-Chr4 33000727 33011209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02477 98 808 PHD Transcription Factor Family AT2G36720 50.964 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02477 - - gmx:100798276 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02477 4 33000727 33011209 Mepo4g02477 4 33000727 33011209 ECH
Mepo3g03404 3 44075825 44081808 Mepo4g02477 4 33000727 33011209 PCT