Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02469 ATGGACACAATGTTGGTTCCTAAATGGCTCAAACCACTTCTTAGTACACCATTTTTCAATGAGTGTCGGATTCACGCCGACGCCGCAAGGAGTGAATGTAACATGTTTTGCTTAGATTGCAATGTTGATGCCTTTTGCTTCTATTGTCGTTCTTCAAAACACAAGGATCATCAAGTCATTCAGATAAGACGATCTTCATATCATGATGTAGTGAGGGTGGCTGAAATTCAGAAAATGTTGGACATTAGTGGAGTACAAACTTATGTGATCAATAGTGCTAGAGTCTTATTTCTGAATGAGAGGCCTCAACCAAAATCTGGAAAAGCAGTTCCTTACATTTGTGAGATTTGTGGAAGAGGCCTTTTAGACCAAGTTCGTTTCTGTTCTTTGGGATGTAAGGAATAA 405 0.3926 MDTMLVPKWLKPLLSTPFFNECRIHADAARSECNMFCLDCNVDAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQKMLDISGVQTYVINSARVLFLNERPQPKSGKAVPYICEICGRGLLDQVRFCSLGCKE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02469 134 SUPERFAMILY B-box zinc-binding domain 21 64 - -
Mepo4g02469 134 Pfam PLATZ transcription factor 63 133 IPR006734 -
Mepo4g02469 134 Gene3D Classic Zinc Finger 21 67 - -
Mepo4g02469 134 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02469 Mepo-Chr4 32906922 32909049 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mepo4g02469 PLATZ 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02469 - - gmx:100809455 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03408 3 44133204 44135718 Mepo4g02469 4 32906922 32909049 PCT