LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g02458	ATGGTTAAGGAAAAGGTTCATATTAACATTGTGGTTATTGGTCATGTCAACTCTGGGAAGTCAACCATTGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGCAAAGAAGGACATTGACACATTTGAGAAAGAAGCTACTGAGATCGACAAGTGTTCATTCAAGTATGCCTGGGTGCTTGACAAACTCAAAGCTGAGCGTGAAAGAGGTATCACAATTGACATTTCTATGTCGAATTTTGAGACAACCAAGTACCGCTGCACTATCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATTACTGGGACAGCCCAAGCTGATTGTGCTCTTCTTATCGTTGATTCCACTCTTGCTGGTTTTGGAGCCGGTATTTTTAAGAATGGTCAGACCCGTGAACATGCTTCAATTGCTTTCGTTCTTGGTGTGAGGCAAATGATCTGCTGCTGTAACAAGGTAAGCTTGATTCACTTTGCAGGCAGTTACAACGTCGAAATAAAGAGCTGA	513	0.423	MVKEKVHINIVVIGHVNSGKSTIAGHLIYKLGGIAKKDIDTFEKEATEIDKCSFKYAWVLDKLKAERERGITIDISMSNFETTKYRCTIIDAPGHRDFIKNMITGTAQADCALLIVDSTLAGFGAGIFKNGQTREHASIAFVLGVRQMICCCNKVSLIHFAGSYNVEIKS	170

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g02458	170	PANTHER	TRANSLATION FACTOR	4	156	-	-
	Mepo4g02458	170	Pfam	Elongation factor Tu GTP binding domain	6	155	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	FunFam	Elongation factor 1-alpha	1	130	-	-
	Mepo4g02458	170	PRINTS	GTP-binding elongation factor signature	148	157	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	PRINTS	GTP-binding elongation factor signature	68	76	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	PRINTS	GTP-binding elongation factor signature	104	115	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	PRINTS	GTP-binding elongation factor signature	9	22	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	PRINTS	GTP-binding elongation factor signature	88	98	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	ProSitePatterns	Translational (tr)-type guanine nucleotide-binding (G) domain signature.	61	76	IPR031157	-
	Mepo4g02458	170	Gene3D	-	1	167	IPR027417	-
	Mepo4g02458	170	ProSiteProfiles	Translational (tr)-type guanine nucleotide-binding (G) domain profile.	5	170	IPR000795	GO:0003924\|GO:0005525
	Mepo4g02458	170	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	159	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g02458	Mepo-Chr4	32779209	32779930	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g02458	1	155	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.710	2.05e-87	259

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g02458	K03231		-	oeu:111393027	248.054