Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02450 ATGGAATGGAATGGAAGCACAAGAAGCTTTGTTCCTCAACCAGAGTCTTCCTTAAGCTTTCTCTACAACTACAACCAATGCTCATATCAAGGAATGATGGAAGTGAAACAACAAGACTGGGCAGAGACAATGTTCCCAGAAATGGAAAAAATGATGAAGTATGGGAACTTGCAAGAAAAGAAAAAGCGATTAACGAGTGAACAGATGGAATCACTGGAGAGTAGTTTTCAAGAGGAGATCAAACTAGACCCTCAAAGGAAGATGAAGCTTTCCAAGGAGTTAGGGTTACAGCCTCGTCAAATTGCTATTTGGTTCCAAAATAGGCGTGCTAGGTGGAAGACCAAGCAACTTGAACACTTATATGATTCACTTAGACACCAATTTGAGGTTGTGTCTAAGGAAAAACAGCAGCTTCAGGATGAGGTTATGAAGTTGAAGGCTATGTTGAAAGAACAAGGTAACTCTTGTGGTAGAATGCAAGGTTACTATACAGAAATGTCAGTGGAAGAAACAGAAACAGTAGAAAGCACATCAGAGGCAGCTCTACGTTGCTCCAACAGAGAGGTGAAGGGAAAGATTCATCAACAGTTGAACATTGATGAAGGAAACTGTTGTTTCAATTTAGAGGACTATAATATTAATAACAATGTTCCACTATTGCCCTACTGGCCTGCTGCTGTACCTTATAACTATCACCCTTAG 702 0.4017 MEWNGSTRSFVPQPESSLSFLYNYNQCSYQGMMEVKQQDWAETMFPEMEKMMKYGNLQEKKKRLTSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLEHLYDSLRHQFEVVSKEKQQLQDEVMKLKAMLKEQGNSCGRMQGYYTEMSVEETETVESTSEAALRCSNREVKGKIHQQLNIDEGNCCFNLEDYNINNNVPLLPYWPAAVPYNYHP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02450 233 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 50 176 IPR045224 GO:0003700
Mepo4g02450 233 CDD homeodomain 60 116 IPR001356 GO:0003677
Mepo4g02450 233 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Mepo4g02450 233 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Mepo4g02450 233 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Mepo4g02450 233 SMART HOX_1 58 119 IPR001356 GO:0003677
Mepo4g02450 233 Coils Coil 121 155 - -
Mepo4g02450 233 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Mepo4g02450 233 SUPERFAMILY Homeodomain-like 60 125 IPR009057 -
Mepo4g02450 233 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Mepo4g02450 233 Gene3D - 55 123 - -
Mepo4g02450 233 Pfam Homeobox associated leucine zipper 115 149 IPR003106 GO:0006355|GO:0043565
Mepo4g02450 233 FunFam Putative homeobox-leucine zipper protein ATHB-51 57 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02450 Mepo-Chr4 32707172 32709125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02450 1 145 Homeobox Transcription Factor Family AT5G03790 52.469 3.71e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo4g02450 Homeodomain 6.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02450 - - gmx:100778007 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02450 4 32707172 32709125 Mepo4g02450 4 32707172 32709125 ECH
Mepo4g02450 4 32707172 32709125 Mepo3g03430 3 44287823 44289272 PCT