Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02447 ATGGCTTCTTGCGACGACGACGACGATTTCTCTCTCCTCCACGACGATAACAACCACCACTCTCACCACCACCACCTCCACCAAACCTTCGCTCCACACCACCACCACAACCACCACTCTCAACACCACTTCTCCACAGCTTCAGTCCAATCCAAACACATCACCACCTCCGTCTCCGCCGCCGTCGCCGACGACGACGGAGACGACACCGATGATTACGGTAATCCATTCGACGATGACGCTGGTAGCGAGAAACGTAAAGATCGAGATCGCGATGAGATCTGTGATGCAACGACGTCGTATGGATTCAACAACAAACGGTCAAAACCGGTTTCTAGCGGTAACGGTGGAGGAAGCGCCGGAGTAGGTGCAGAGTATAGAAAAGATCGAGAAGAATGGAGTGATACAGCGATAGTGTGTTTACTCGAAGCGTATACAGAGAAATTTACGCAGCTGAATCGAGGGAATCTAAGAGGAAGAGATTGGGAAGAAGTAGCTTCAATGGTGAGTGAACGGTGTGAGAATCAATCAAAGAGTGTGGAACAGTGTAAGAACAAGGTTGATAATTTGAAAAAAAGGTATAAGCTAGAGAGGCATAGAATGAATAATGGTTGTATTTCTGCTAGTCATTGGCCTTGGTTTAAGCAGATGGAACATATTGTTGGGAATTCGCTTCCGGCCAAGTTTGCTGATGATGACAAAGCTATTGTTCCTGCTTCCATTTCACCTAGGCAATCTAAGAGATATGGAGTGGCTACGTCCAGCAGTGGAGGTCAAGTAAACAGCCTGAAGTCCAAAGCATTGTCAAACCTTAGATGGCGGAGAGTTGTTCTAAAAATTAGTGGATCGGCACTTACCGGATCCGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAATGAAGTTGCAATAGCTTCCCGTCTTGGTGTGGAGGTAGCAATTGTTGTTGGAGGTCGTAATTTCTTCTGTGGCGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAACTCCTTACTGCTTCAATCAACTTTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTTCAATGCAGGCGTTTGCTGAACCATACAATAGGCAACGGGCCATTAGGCATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAATCCACTTTTCTCAACCGACATATCTGCTGCTCTTCGGGCTTCAGAGATTAATGCTCAGGCTGTCCTCAAAGGTACTAACGTAGATGGTGTATATGACTGCAACTCACGAGACAACAATTTCACTTTCGAGCACATATCCTTCAGGGAGCTAGTGTCTAGAGGTGTCACCTCCATGGATATGTCAGCCCTGACATTCTGCGAGGAGAATGCCATTCCTGTTGTAGTTTTTAATCTATTGGCACCCGGGAACATTTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACACTTATTGACCAAACTGGAGCAATAAGCTAA 1539 0.4594 MASCDDDDDFSLLHDDNNHHSHHHHLHQTFAPHHHHNHHSQHHFSTASVQSKHITTSVSAAVADDDGDDTDDYGNPFDDDAGSEKRKDRDRDEICDATTSYGFNNKRSKPVSSGNGGGSAGVGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASMVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMNNGCISASHWPWFKQMEHIVGNSLPAKFADDDKAIVPASISPRQSKRYGVATSSSGGQVNSLKSKALSNLRWRRVVLKISGSALTGSDTCNIDPKVAMLVSNEVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSLLLQSTLEKMGVQTRVQTSVSMQAFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDISAALRASEINAQAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCGEQVGTLIDQTGAIS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02447 512 Hamap Uridylate kinase [pyrH]. 271 506 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mepo4g02447 512 MobiDBLite consensus disorder prediction 43 58 - -
Mepo4g02447 512 Coils Coil 173 200 - -
Mepo4g02447 512 Gene3D - 133 196 - -
Mepo4g02447 512 Pfam Amino acid kinase family 275 485 IPR001048 -
Mepo4g02447 512 CDD AAK_UMPK-PyrH-Ec 274 506 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mepo4g02447 512 Gene3D - 264 511 IPR036393 -
Mepo4g02447 512 MobiDBLite consensus disorder prediction 98 115 - -
Mepo4g02447 512 PANTHER URIDYLATE KINASE 126 511 - -
Mepo4g02447 512 SUPERFAMILY Carbamate kinase-like 272 505 IPR036393 -
Mepo4g02447 512 FunFam Uridylate kinase isoform A 265 511 - -
Mepo4g02447 512 MobiDBLite consensus disorder prediction 19 122 - -
Mepo4g02447 512 MobiDBLite consensus disorder prediction 20 42 - -
Mepo4g02447 512 MobiDBLite consensus disorder prediction 78 96 - -
Mepo4g02447 512 Pfam Myb/SANT-like DNA-binding domain 130 220 IPR044822 -
Mepo4g02447 512 FunFam Aspartate/glutamate/uridylate kinase family protein 133 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02447 Mepo-Chr4 32655073 32659832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02447 112 224 Trihelix Transcription Factor Family AT3G14180 37.607 1.13e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo4g02447 AA_kinase 8.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02447 - - gmx:100805176 780.785